Protein–RNA interactions for Protein: Q8BI17

Sh2d7, SH2 domain-containing protein 7, mousemouse

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d7Q8BI17 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d7Q8BI17 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.56■□□□□ 0.56
Sh2d7Q8BI17 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Sh2d7Q8BI17 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d7Q8BI17 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d7Q8BI17 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d7Q8BI17 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d7Q8BI17 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d7Q8BI17 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d7Q8BI17 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d7Q8BI17 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d7Q8BI17 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d7Q8BI17 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d7Q8BI17 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d7Q8BI17 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.54■□□□□ 0.56
Sh2d7Q8BI17 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.54■□□□□ 0.56
Sh2d7Q8BI17 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d7Q8BI17 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d7Q8BI17 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sh2d7Q8BI17 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sh2d7Q8BI17 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.54■□□□□ 0.56
Sh2d7Q8BI17 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d7Q8BI17 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.54■□□□□ 0.56
Sh2d7Q8BI17 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d7Q8BI17 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d7Q8BI17 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.53■□□□□ 0.56
Sh2d7Q8BI17 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d7Q8BI17 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.53■□□□□ 0.56
Sh2d7Q8BI17 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d7Q8BI17 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d7Q8BI17 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sh2d7Q8BI17 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d7Q8BI17 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d7Q8BI17 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d7Q8BI17 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d7Q8BI17 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Sh2d7Q8BI17 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d7Q8BI17 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d7Q8BI17 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d7Q8BI17 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d7Q8BI17 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d7Q8BI17 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.52■□□□□ 0.56
Sh2d7Q8BI17 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.52■□□□□ 0.56
Sh2d7Q8BI17 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d7Q8BI17 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d7Q8BI17 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d7Q8BI17 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d7Q8BI17 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh2d7Q8BI17 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sh2d7Q8BI17 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Sh2d7Q8BI17 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d7Q8BI17 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d7Q8BI17 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh2d7Q8BI17 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.51■□□□□ 0.55
Sh2d7Q8BI17 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.51■□□□□ 0.55
Sh2d7Q8BI17 Rps24-207ENSMUST00000224568 714 ntBASIC18.51■□□□□ 0.55
Sh2d7Q8BI17 Gm9959-201ENSMUST00000068277 390 ntBASIC18.51■□□□□ 0.55
Sh2d7Q8BI17 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d7Q8BI17 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d7Q8BI17 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sh2d7Q8BI17 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d7Q8BI17 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d7Q8BI17 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d7Q8BI17 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d7Q8BI17 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d7Q8BI17 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d7Q8BI17 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.5■□□□□ 0.55
Sh2d7Q8BI17 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d7Q8BI17 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d7Q8BI17 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d7Q8BI17 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.5■□□□□ 0.55
Sh2d7Q8BI17 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d7Q8BI17 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d7Q8BI17 Gm14117-201ENSMUST00000122417 843 ntBASIC18.49■□□□□ 0.55
Sh2d7Q8BI17 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.49■□□□□ 0.55
Sh2d7Q8BI17 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.49■□□□□ 0.55
Sh2d7Q8BI17 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d7Q8BI17 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.49■□□□□ 0.55
Sh2d7Q8BI17 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Sh2d7Q8BI17 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d7Q8BI17 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sh2d7Q8BI17 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d7Q8BI17 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d7Q8BI17 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d7Q8BI17 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d7Q8BI17 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d7Q8BI17 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sh2d7Q8BI17 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.48■□□□□ 0.55
Sh2d7Q8BI17 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d7Q8BI17 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.48■□□□□ 0.55
Sh2d7Q8BI17 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
Sh2d7Q8BI17 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d7Q8BI17 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d7Q8BI17 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d7Q8BI17 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh2d7Q8BI17 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sh2d7Q8BI17 Etf1-202ENSMUST00000180351 108 ntBASIC18.47■□□□□ 0.55
Sh2d7Q8BI17 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.47■□□□□ 0.55
Sh2d7Q8BI17 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Sh2d7Q8BI17 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms