Protein–RNA interactions for Protein: Q8BGR5

Fam53b, Protein FAM53B, mousemouse

Predictions only

Length 422 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53bQ8BGR5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam53bQ8BGR5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam53bQ8BGR5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam53bQ8BGR5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Fam53bQ8BGR5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam53bQ8BGR5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam53bQ8BGR5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam53bQ8BGR5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Fam53bQ8BGR5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam53bQ8BGR5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Fam53bQ8BGR5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.46■□□□□ 0.55
Fam53bQ8BGR5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam53bQ8BGR5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam53bQ8BGR5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam53bQ8BGR5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Fam53bQ8BGR5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam53bQ8BGR5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam53bQ8BGR5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam53bQ8BGR5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Fam53bQ8BGR5 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.45■□□□□ 0.54
Fam53bQ8BGR5 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.45■□□□□ 0.54
Fam53bQ8BGR5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam53bQ8BGR5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam53bQ8BGR5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam53bQ8BGR5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam53bQ8BGR5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam53bQ8BGR5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.43■□□□□ 0.54
Fam53bQ8BGR5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Fam53bQ8BGR5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Fam53bQ8BGR5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Fam53bQ8BGR5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.43■□□□□ 0.54
Fam53bQ8BGR5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.43■□□□□ 0.54
Fam53bQ8BGR5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Fam53bQ8BGR5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Fam53bQ8BGR5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Fam53bQ8BGR5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Fam53bQ8BGR5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Fam53bQ8BGR5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Fam53bQ8BGR5 Gm5812-201ENSMUST00000061073 957 ntBASIC18.42■□□□□ 0.54
Fam53bQ8BGR5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Fam53bQ8BGR5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fam53bQ8BGR5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fam53bQ8BGR5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.42■□□□□ 0.54
Fam53bQ8BGR5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.42■□□□□ 0.54
Fam53bQ8BGR5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fam53bQ8BGR5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam53bQ8BGR5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam53bQ8BGR5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam53bQ8BGR5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Fam53bQ8BGR5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Fam53bQ8BGR5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.41■□□□□ 0.54
Fam53bQ8BGR5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam53bQ8BGR5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.41■□□□□ 0.54
Fam53bQ8BGR5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam53bQ8BGR5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Fam53bQ8BGR5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam53bQ8BGR5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam53bQ8BGR5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam53bQ8BGR5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam53bQ8BGR5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam53bQ8BGR5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Fam53bQ8BGR5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam53bQ8BGR5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Fam53bQ8BGR5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Fam53bQ8BGR5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
Fam53bQ8BGR5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam53bQ8BGR5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Fam53bQ8BGR5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam53bQ8BGR5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam53bQ8BGR5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam53bQ8BGR5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Fam53bQ8BGR5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.38■□□□□ 0.53
Fam53bQ8BGR5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam53bQ8BGR5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam53bQ8BGR5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam53bQ8BGR5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.38■□□□□ 0.53
Fam53bQ8BGR5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam53bQ8BGR5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Fam53bQ8BGR5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam53bQ8BGR5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.38■□□□□ 0.53
Fam53bQ8BGR5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam53bQ8BGR5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam53bQ8BGR5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.37■□□□□ 0.53
Fam53bQ8BGR5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.37■□□□□ 0.53
Fam53bQ8BGR5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam53bQ8BGR5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam53bQ8BGR5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam53bQ8BGR5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Fam53bQ8BGR5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam53bQ8BGR5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Fam53bQ8BGR5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam53bQ8BGR5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Fam53bQ8BGR5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam53bQ8BGR5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Fam53bQ8BGR5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Fam53bQ8BGR5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam53bQ8BGR5 Gm10232-201ENSMUST00000089221 720 ntBASIC18.36■□□□□ 0.53
Fam53bQ8BGR5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Fam53bQ8BGR5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam53bQ8BGR5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms