Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx42Q810A7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx42Q810A7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.98■□□□□ 0.95
Ddx42Q810A7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.98■□□□□ 0.95
Ddx42Q810A7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx42Q810A7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx42Q810A7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx42Q810A7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ddx42Q810A7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ddx42Q810A7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx42Q810A7 Gm15546-201ENSMUST00000122095 826 ntBASIC20.97■□□□□ 0.95
Ddx42Q810A7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ddx42Q810A7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.97■□□□□ 0.95
Ddx42Q810A7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx42Q810A7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ddx42Q810A7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx42Q810A7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx42Q810A7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx42Q810A7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx42Q810A7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Ddx42Q810A7 Golph3-202ENSMUST00000226517 2359 ntBASIC20.95■□□□□ 0.94
Ddx42Q810A7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx42Q810A7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx42Q810A7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx42Q810A7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx42Q810A7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx42Q810A7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx42Q810A7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx42Q810A7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx42Q810A7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx42Q810A7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.94■□□□□ 0.94
Ddx42Q810A7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx42Q810A7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ddx42Q810A7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx42Q810A7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx42Q810A7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx42Q810A7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx42Q810A7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx42Q810A7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx42Q810A7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx42Q810A7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.92■□□□□ 0.94
Ddx42Q810A7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx42Q810A7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx42Q810A7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx42Q810A7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ddx42Q810A7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.92■□□□□ 0.94
Ddx42Q810A7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ddx42Q810A7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
Ddx42Q810A7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx42Q810A7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx42Q810A7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ddx42Q810A7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx42Q810A7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx42Q810A7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx42Q810A7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ddx42Q810A7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Ddx42Q810A7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx42Q810A7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx42Q810A7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ddx42Q810A7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx42Q810A7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx42Q810A7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx42Q810A7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx42Q810A7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx42Q810A7 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.9■□□□□ 0.94
Ddx42Q810A7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx42Q810A7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx42Q810A7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx42Q810A7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
Ddx42Q810A7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx42Q810A7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx42Q810A7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx42Q810A7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx42Q810A7 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.88■□□□□ 0.93
Ddx42Q810A7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx42Q810A7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ddx42Q810A7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.88■□□□□ 0.93
Ddx42Q810A7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx42Q810A7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx42Q810A7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Ddx42Q810A7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ddx42Q810A7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx42Q810A7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx42Q810A7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ddx42Q810A7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx42Q810A7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx42Q810A7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx42Q810A7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx42Q810A7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx42Q810A7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
Ddx42Q810A7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx42Q810A7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ddx42Q810A7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx42Q810A7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx42Q810A7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ddx42Q810A7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ddx42Q810A7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx42Q810A7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ddx42Q810A7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx42Q810A7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms