Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
Trnp1Q80ZI1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC24.11■■□□□ 1.45
Trnp1Q80ZI1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Trnp1Q80ZI1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Trnp1Q80ZI1 Gm7291-201ENSMUST00000199147 382 ntBASIC24.1■■□□□ 1.45
Trnp1Q80ZI1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Trnp1Q80ZI1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Trnp1Q80ZI1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Trnp1Q80ZI1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Trnp1Q80ZI1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Trnp1Q80ZI1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Trnp1Q80ZI1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Trnp1Q80ZI1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Trnp1Q80ZI1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Trnp1Q80ZI1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Trnp1Q80ZI1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Trnp1Q80ZI1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Trnp1Q80ZI1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Trnp1Q80ZI1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Trnp1Q80ZI1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Trnp1Q80ZI1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC24.06■■□□□ 1.44
Trnp1Q80ZI1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Trnp1Q80ZI1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Trnp1Q80ZI1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Trnp1Q80ZI1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Trnp1Q80ZI1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trnp1Q80ZI1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Trnp1Q80ZI1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trnp1Q80ZI1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC24.05■■□□□ 1.44
Trnp1Q80ZI1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.05■■□□□ 1.44
Trnp1Q80ZI1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Trnp1Q80ZI1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC24.04■■□□□ 1.44
Trnp1Q80ZI1 Gm12251-201ENSMUST00000117893 792 ntBASIC24.04■■□□□ 1.44
Trnp1Q80ZI1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Trnp1Q80ZI1 Gm43759-201ENSMUST00000196925 1261 ntBASIC24.04■■□□□ 1.44
Trnp1Q80ZI1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.04■■□□□ 1.44
Trnp1Q80ZI1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Trnp1Q80ZI1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Trnp1Q80ZI1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Trnp1Q80ZI1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Trnp1Q80ZI1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Trnp1Q80ZI1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Trnp1Q80ZI1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC24.03■■□□□ 1.44
Trnp1Q80ZI1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC24.03■■□□□ 1.44
Trnp1Q80ZI1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Trnp1Q80ZI1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC24.03■■□□□ 1.44
Trnp1Q80ZI1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trnp1Q80ZI1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Trnp1Q80ZI1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC24.02■■□□□ 1.44
Trnp1Q80ZI1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trnp1Q80ZI1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trnp1Q80ZI1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
Trnp1Q80ZI1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Trnp1Q80ZI1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Trnp1Q80ZI1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Trnp1Q80ZI1 Gm7143-201ENSMUST00000222811 859 ntBASIC24.01■■□□□ 1.43
Trnp1Q80ZI1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Trnp1Q80ZI1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Trnp1Q80ZI1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC24■■□□□ 1.43
Trnp1Q80ZI1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24■■□□□ 1.43
Trnp1Q80ZI1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC24■■□□□ 1.43
Trnp1Q80ZI1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trnp1Q80ZI1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC24■■□□□ 1.43
Trnp1Q80ZI1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Trnp1Q80ZI1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trnp1Q80ZI1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Trnp1Q80ZI1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trnp1Q80ZI1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Trnp1Q80ZI1 Gm26571-201ENSMUST00000181399 666 ntBASIC23.97■■□□□ 1.43
Trnp1Q80ZI1 Gm27405-201ENSMUST00000184201 112 ntBASIC23.97■■□□□ 1.43
Trnp1Q80ZI1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trnp1Q80ZI1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trnp1Q80ZI1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trnp1Q80ZI1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trnp1Q80ZI1 Gm10493-201ENSMUST00000097270 612 ntBASIC23.97■■□□□ 1.43
Trnp1Q80ZI1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.96■■□□□ 1.43
Trnp1Q80ZI1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
Trnp1Q80ZI1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trnp1Q80ZI1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trnp1Q80ZI1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.96■■□□□ 1.43
Trnp1Q80ZI1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.96■■□□□ 1.43
Trnp1Q80ZI1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trnp1Q80ZI1 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.96■■□□□ 1.43
Trnp1Q80ZI1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trnp1Q80ZI1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Trnp1Q80ZI1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.95■■□□□ 1.42
Trnp1Q80ZI1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Trnp1Q80ZI1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trnp1Q80ZI1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Trnp1Q80ZI1 Gm26833-201ENSMUST00000180899 440 ntBASIC23.94■■□□□ 1.42
Trnp1Q80ZI1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.94■■□□□ 1.42
Trnp1Q80ZI1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trnp1Q80ZI1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Trnp1Q80ZI1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trnp1Q80ZI1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trnp1Q80ZI1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trnp1Q80ZI1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trnp1Q80ZI1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trnp1Q80ZI1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trnp1Q80ZI1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms