Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf38bQ80SY5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.77■■□□□ 1.07
Prpf38bQ80SY5 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.77■■□□□ 1.07
Prpf38bQ80SY5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.76■■□□□ 1.07
Prpf38bQ80SY5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf38bQ80SY5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf38bQ80SY5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf38bQ80SY5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf38bQ80SY5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf38bQ80SY5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
Prpf38bQ80SY5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.75■■□□□ 1.07
Prpf38bQ80SY5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Prpf38bQ80SY5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf38bQ80SY5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf38bQ80SY5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.75■■□□□ 1.07
Prpf38bQ80SY5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Prpf38bQ80SY5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf38bQ80SY5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf38bQ80SY5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf38bQ80SY5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Prpf38bQ80SY5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.74■■□□□ 1.07
Prpf38bQ80SY5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.74■■□□□ 1.07
Prpf38bQ80SY5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf38bQ80SY5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf38bQ80SY5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf38bQ80SY5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf38bQ80SY5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf38bQ80SY5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Prpf38bQ80SY5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
Prpf38bQ80SY5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf38bQ80SY5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf38bQ80SY5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.73■■□□□ 1.07
Prpf38bQ80SY5 Gm10399-202ENSMUST00000202768 748 ntBASIC21.73■■□□□ 1.07
Prpf38bQ80SY5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.73■■□□□ 1.07
Prpf38bQ80SY5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf38bQ80SY5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf38bQ80SY5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf38bQ80SY5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf38bQ80SY5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf38bQ80SY5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
Prpf38bQ80SY5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf38bQ80SY5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf38bQ80SY5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Prpf38bQ80SY5 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.72■■□□□ 1.07
Prpf38bQ80SY5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf38bQ80SY5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.72■■□□□ 1.07
Prpf38bQ80SY5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf38bQ80SY5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38bQ80SY5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38bQ80SY5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.71■■□□□ 1.07
Prpf38bQ80SY5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.71■■□□□ 1.07
Prpf38bQ80SY5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38bQ80SY5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.71■■□□□ 1.07
Prpf38bQ80SY5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38bQ80SY5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38bQ80SY5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38bQ80SY5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Prpf38bQ80SY5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38bQ80SY5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38bQ80SY5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38bQ80SY5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.7■■□□□ 1.06
Prpf38bQ80SY5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38bQ80SY5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38bQ80SY5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.7■■□□□ 1.06
Prpf38bQ80SY5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38bQ80SY5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Prpf38bQ80SY5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.69■■□□□ 1.06
Prpf38bQ80SY5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Prpf38bQ80SY5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Prpf38bQ80SY5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf38bQ80SY5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf38bQ80SY5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Prpf38bQ80SY5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Prpf38bQ80SY5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf38bQ80SY5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.68■■□□□ 1.06
Prpf38bQ80SY5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf38bQ80SY5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf38bQ80SY5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.68■■□□□ 1.06
Prpf38bQ80SY5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf38bQ80SY5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf38bQ80SY5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf38bQ80SY5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Prpf38bQ80SY5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38bQ80SY5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38bQ80SY5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38bQ80SY5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Prpf38bQ80SY5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.67■■□□□ 1.06
Prpf38bQ80SY5 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.67■■□□□ 1.06
Prpf38bQ80SY5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf38bQ80SY5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf38bQ80SY5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf38bQ80SY5 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.66■■□□□ 1.06
Prpf38bQ80SY5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.66■■□□□ 1.06
Prpf38bQ80SY5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf38bQ80SY5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf38bQ80SY5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Prpf38bQ80SY5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf38bQ80SY5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf38bQ80SY5 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.65■■□□□ 1.06
Prpf38bQ80SY5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms