Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh8Q7TSK3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pcdh8Q7TSK3 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.61■□□□□ 0.89
Pcdh8Q7TSK3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh8Q7TSK3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh8Q7TSK3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh8Q7TSK3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh8Q7TSK3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh8Q7TSK3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh8Q7TSK3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh8Q7TSK3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdh8Q7TSK3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh8Q7TSK3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh8Q7TSK3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh8Q7TSK3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh8Q7TSK3 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.6■□□□□ 0.89
Pcdh8Q7TSK3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.6■□□□□ 0.89
Pcdh8Q7TSK3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh8Q7TSK3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh8Q7TSK3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh8Q7TSK3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh8Q7TSK3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdh8Q7TSK3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh8Q7TSK3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh8Q7TSK3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh8Q7TSK3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdh8Q7TSK3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh8Q7TSK3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh8Q7TSK3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.58■□□□□ 0.89
Pcdh8Q7TSK3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh8Q7TSK3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh8Q7TSK3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Pcdh8Q7TSK3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh8Q7TSK3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh8Q7TSK3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh8Q7TSK3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh8Q7TSK3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh8Q7TSK3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh8Q7TSK3 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.56■□□□□ 0.88
Pcdh8Q7TSK3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdh8Q7TSK3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh8Q7TSK3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh8Q7TSK3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdh8Q7TSK3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
Pcdh8Q7TSK3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pcdh8Q7TSK3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.55■□□□□ 0.88
Pcdh8Q7TSK3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh8Q7TSK3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdh8Q7TSK3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh8Q7TSK3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh8Q7TSK3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh8Q7TSK3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdh8Q7TSK3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.55■□□□□ 0.88
Pcdh8Q7TSK3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh8Q7TSK3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh8Q7TSK3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh8Q7TSK3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh8Q7TSK3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh8Q7TSK3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh8Q7TSK3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh8Q7TSK3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Pcdh8Q7TSK3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh8Q7TSK3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh8Q7TSK3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh8Q7TSK3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh8Q7TSK3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh8Q7TSK3 Gm12922-201ENSMUST00000120626 809 ntBASIC20.53■□□□□ 0.88
Pcdh8Q7TSK3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.53■□□□□ 0.88
Pcdh8Q7TSK3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdh8Q7TSK3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.53■□□□□ 0.88
Pcdh8Q7TSK3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdh8Q7TSK3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh8Q7TSK3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdh8Q7TSK3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh8Q7TSK3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh8Q7TSK3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh8Q7TSK3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
Pcdh8Q7TSK3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh8Q7TSK3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh8Q7TSK3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh8Q7TSK3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh8Q7TSK3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdh8Q7TSK3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdh8Q7TSK3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdh8Q7TSK3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh8Q7TSK3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.51■□□□□ 0.87
Pcdh8Q7TSK3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh8Q7TSK3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pcdh8Q7TSK3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Pcdh8Q7TSK3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh8Q7TSK3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh8Q7TSK3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pcdh8Q7TSK3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh8Q7TSK3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.5■□□□□ 0.87
Pcdh8Q7TSK3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdh8Q7TSK3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdh8Q7TSK3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh8Q7TSK3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Pcdh8Q7TSK3 Gm21956-201ENSMUST00000179946 522 ntBASIC20.49■□□□□ 0.87
Pcdh8Q7TSK3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms