Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
Knl1Q66JQ7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC30.4■■■□□ 2.46
Knl1Q66JQ7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC30.4■■■□□ 2.46
Knl1Q66JQ7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Knl1Q66JQ7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Knl1Q66JQ7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Knl1Q66JQ7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Knl1Q66JQ7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Knl1Q66JQ7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Knl1Q66JQ7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Knl1Q66JQ7 Gm37179-201ENSMUST00000194862 823 ntBASIC30.38■■■□□ 2.45
Knl1Q66JQ7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Knl1Q66JQ7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Knl1Q66JQ7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Knl1Q66JQ7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Knl1Q66JQ7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Knl1Q66JQ7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Knl1Q66JQ7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Knl1Q66JQ7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Knl1Q66JQ7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC30.36■■■□□ 2.45
Knl1Q66JQ7 Gm5576-201ENSMUST00000075809 1236 ntBASIC30.36■■■□□ 2.45
Knl1Q66JQ7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Knl1Q66JQ7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC30.35■■■□□ 2.45
Knl1Q66JQ7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Knl1Q66JQ7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
Knl1Q66JQ7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Knl1Q66JQ7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Knl1Q66JQ7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Knl1Q66JQ7 Gm10493-201ENSMUST00000097270 612 ntBASIC30.33■■■□□ 2.45
Knl1Q66JQ7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Knl1Q66JQ7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC30.33■■■□□ 2.45
Knl1Q66JQ7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Knl1Q66JQ7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC30.32■■■□□ 2.45
Knl1Q66JQ7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Knl1Q66JQ7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC30.32■■■□□ 2.44
Knl1Q66JQ7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
Knl1Q66JQ7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Knl1Q66JQ7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Knl1Q66JQ7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Knl1Q66JQ7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Knl1Q66JQ7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
Knl1Q66JQ7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Knl1Q66JQ7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Knl1Q66JQ7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC30.3■■■□□ 2.44
Knl1Q66JQ7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Knl1Q66JQ7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
Knl1Q66JQ7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
Knl1Q66JQ7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Knl1Q66JQ7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Knl1Q66JQ7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC30.3■■■□□ 2.44
Knl1Q66JQ7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC30.29■■■□□ 2.44
Knl1Q66JQ7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Knl1Q66JQ7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Knl1Q66JQ7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Knl1Q66JQ7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Knl1Q66JQ7 AC112142.1-201ENSMUST00000228796 918 ntBASIC30.29■■■□□ 2.44
Knl1Q66JQ7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
Knl1Q66JQ7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Knl1Q66JQ7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Knl1Q66JQ7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Knl1Q66JQ7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC30.28■■■□□ 2.44
Knl1Q66JQ7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Knl1Q66JQ7 Gm42569-201ENSMUST00000200539 472 ntBASIC30.27■■■□□ 2.44
Knl1Q66JQ7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Knl1Q66JQ7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Knl1Q66JQ7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Knl1Q66JQ7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Knl1Q66JQ7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC30.25■■■□□ 2.43
Knl1Q66JQ7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Knl1Q66JQ7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Knl1Q66JQ7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Knl1Q66JQ7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Knl1Q66JQ7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Knl1Q66JQ7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Knl1Q66JQ7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Knl1Q66JQ7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC30.24■■■□□ 2.43
Knl1Q66JQ7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Knl1Q66JQ7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Knl1Q66JQ7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Knl1Q66JQ7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
Knl1Q66JQ7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Knl1Q66JQ7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Knl1Q66JQ7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC30.22■■■□□ 2.43
Knl1Q66JQ7 Gm43759-201ENSMUST00000196925 1261 ntBASIC30.22■■■□□ 2.43
Knl1Q66JQ7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Knl1Q66JQ7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Knl1Q66JQ7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC30.21■■■□□ 2.43
Knl1Q66JQ7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Knl1Q66JQ7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC30.21■■■□□ 2.43
Knl1Q66JQ7 AC099934.2-201ENSMUST00000196389 70 ntBASIC30.2■■■□□ 2.43
Knl1Q66JQ7 AC156953.1-201ENSMUST00000196953 70 ntBASIC30.2■■■□□ 2.43
Knl1Q66JQ7 AC157822.2-201ENSMUST00000200291 70 ntBASIC30.2■■■□□ 2.43
Knl1Q66JQ7 Spcs1-204ENSMUST00000226782 949 ntBASIC30.2■■■□□ 2.43
Knl1Q66JQ7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Knl1Q66JQ7 Gm26833-201ENSMUST00000180899 440 ntBASIC30.19■■■□□ 2.42
Knl1Q66JQ7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Knl1Q66JQ7 Gm10129-202ENSMUST00000193100 1316 ntBASIC30.19■■■□□ 2.42
Knl1Q66JQ7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Knl1Q66JQ7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
Knl1Q66JQ7 Gm6085-201ENSMUST00000182774 1470 ntBASIC30.18■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms