Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.3■■□□□ 1.32
Ddx4Q61496 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx4Q61496 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx4Q61496 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx4Q61496 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx4Q61496 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx4Q61496 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx4Q61496 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx4Q61496 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx4Q61496 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ddx4Q61496 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx4Q61496 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.28■■□□□ 1.32
Ddx4Q61496 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx4Q61496 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx4Q61496 Gm8493-201ENSMUST00000196881 489 ntBASIC23.28■■□□□ 1.32
Ddx4Q61496 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx4Q61496 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx4Q61496 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ddx4Q61496 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ddx4Q61496 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ddx4Q61496 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.31
Ddx4Q61496 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx4Q61496 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx4Q61496 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx4Q61496 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.26■■□□□ 1.31
Ddx4Q61496 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.26■■□□□ 1.31
Ddx4Q61496 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Ddx4Q61496 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx4Q61496 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx4Q61496 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx4Q61496 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx4Q61496 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.25■■□□□ 1.31
Ddx4Q61496 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.25■■□□□ 1.31
Ddx4Q61496 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.25■■□□□ 1.31
Ddx4Q61496 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx4Q61496 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
Ddx4Q61496 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx4Q61496 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.24■■□□□ 1.31
Ddx4Q61496 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx4Q61496 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx4Q61496 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx4Q61496 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx4Q61496 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx4Q61496 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.23■■□□□ 1.31
Ddx4Q61496 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx4Q61496 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx4Q61496 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Ddx4Q61496 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx4Q61496 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx4Q61496 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Ddx4Q61496 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx4Q61496 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Ddx4Q61496 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx4Q61496 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx4Q61496 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.21■■□□□ 1.31
Ddx4Q61496 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx4Q61496 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.21■■□□□ 1.31
Ddx4Q61496 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.2■■□□□ 1.3
Ddx4Q61496 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx4Q61496 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx4Q61496 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Ddx4Q61496 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx4Q61496 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.2■■□□□ 1.3
Ddx4Q61496 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx4Q61496 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.2■■□□□ 1.3
Ddx4Q61496 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx4Q61496 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx4Q61496 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx4Q61496 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Ddx4Q61496 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.19■■□□□ 1.3
Ddx4Q61496 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx4Q61496 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.19■■□□□ 1.3
Ddx4Q61496 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.19■■□□□ 1.3
Ddx4Q61496 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx4Q61496 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ddx4Q61496 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.18■■□□□ 1.3
Ddx4Q61496 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx4Q61496 Gm7291-201ENSMUST00000199147 382 ntBASIC23.18■■□□□ 1.3
Ddx4Q61496 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.18■■□□□ 1.3
Ddx4Q61496 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx4Q61496 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx4Q61496 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx4Q61496 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx4Q61496 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx4Q61496 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx4Q61496 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx4Q61496 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
Ddx4Q61496 Gm43173-201ENSMUST00000202246 593 ntBASIC23.16■■□□□ 1.3
Ddx4Q61496 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx4Q61496 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx4Q61496 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx4Q61496 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ddx4Q61496 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx4Q61496 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx4Q61496 Gm7143-201ENSMUST00000222811 859 ntBASIC23.15■■□□□ 1.3
Ddx4Q61496 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx4Q61496 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Ddx4Q61496 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx4Q61496 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ddx4Q61496 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms