Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Cacna1eQ61290 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacna1eQ61290 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.88■□□□□ 0.93
Cacna1eQ61290 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacna1eQ61290 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
Cacna1eQ61290 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cacna1eQ61290 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.88■□□□□ 0.93
Cacna1eQ61290 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacna1eQ61290 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacna1eQ61290 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacna1eQ61290 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Cacna1eQ61290 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacna1eQ61290 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacna1eQ61290 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cacna1eQ61290 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Cacna1eQ61290 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacna1eQ61290 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cacna1eQ61290 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.86■□□□□ 0.93
Cacna1eQ61290 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacna1eQ61290 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.86■□□□□ 0.93
Cacna1eQ61290 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cacna1eQ61290 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
Cacna1eQ61290 Gm12251-201ENSMUST00000117893 792 ntBASIC20.85■□□□□ 0.93
Cacna1eQ61290 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1eQ61290 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1eQ61290 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1eQ61290 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.85■□□□□ 0.93
Cacna1eQ61290 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1eQ61290 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1eQ61290 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1eQ61290 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1eQ61290 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1eQ61290 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1eQ61290 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1eQ61290 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1eQ61290 Gm18284-201ENSMUST00000172604 624 ntBASIC20.84■□□□□ 0.93
Cacna1eQ61290 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1eQ61290 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1eQ61290 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1eQ61290 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.84■□□□□ 0.93
Cacna1eQ61290 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cacna1eQ61290 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cacna1eQ61290 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.83■□□□□ 0.93
Cacna1eQ61290 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cacna1eQ61290 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cacna1eQ61290 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cacna1eQ61290 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Cacna1eQ61290 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1eQ61290 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1eQ61290 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Cacna1eQ61290 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cacna1eQ61290 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cacna1eQ61290 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1eQ61290 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1eQ61290 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cacna1eQ61290 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1eQ61290 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1eQ61290 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1eQ61290 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1eQ61290 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1eQ61290 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.81■□□□□ 0.92
Cacna1eQ61290 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.81■□□□□ 0.92
Cacna1eQ61290 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Cacna1eQ61290 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1eQ61290 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1eQ61290 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1eQ61290 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1eQ61290 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cacna1eQ61290 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cacna1eQ61290 Gm9870-201ENSMUST00000063874 645 ntBASIC20.8■□□□□ 0.92
Cacna1eQ61290 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1eQ61290 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Cacna1eQ61290 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1eQ61290 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1eQ61290 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.79■□□□□ 0.92
Cacna1eQ61290 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Cacna1eQ61290 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1eQ61290 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1eQ61290 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1eQ61290 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1eQ61290 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1eQ61290 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Cacna1eQ61290 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1eQ61290 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1eQ61290 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1eQ61290 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1eQ61290 Gm43173-201ENSMUST00000202246 593 ntBASIC20.78■□□□□ 0.92
Cacna1eQ61290 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.77■□□□□ 0.92
Cacna1eQ61290 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cacna1eQ61290 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Cacna1eQ61290 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.77■□□□□ 0.92
Cacna1eQ61290 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Cacna1eQ61290 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1eQ61290 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1eQ61290 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cacna1eQ61290 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cacna1eQ61290 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cacna1eQ61290 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1eQ61290 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1eQ61290 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms