Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clns1aQ61189 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clns1aQ61189 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clns1aQ61189 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clns1aQ61189 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Clns1aQ61189 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clns1aQ61189 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clns1aQ61189 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Clns1aQ61189 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clns1aQ61189 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clns1aQ61189 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clns1aQ61189 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clns1aQ61189 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clns1aQ61189 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.77■□□□□ 0.44
Clns1aQ61189 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.77■□□□□ 0.44
Clns1aQ61189 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clns1aQ61189 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clns1aQ61189 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clns1aQ61189 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Clns1aQ61189 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.76■□□□□ 0.43
Clns1aQ61189 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clns1aQ61189 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Clns1aQ61189 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clns1aQ61189 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clns1aQ61189 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clns1aQ61189 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clns1aQ61189 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clns1aQ61189 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clns1aQ61189 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clns1aQ61189 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Clns1aQ61189 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.75■□□□□ 0.43
Clns1aQ61189 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Clns1aQ61189 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Clns1aQ61189 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clns1aQ61189 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clns1aQ61189 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clns1aQ61189 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Clns1aQ61189 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.74■□□□□ 0.43
Clns1aQ61189 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clns1aQ61189 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.74■□□□□ 0.43
Clns1aQ61189 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clns1aQ61189 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clns1aQ61189 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clns1aQ61189 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clns1aQ61189 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.73■□□□□ 0.43
Clns1aQ61189 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clns1aQ61189 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clns1aQ61189 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clns1aQ61189 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clns1aQ61189 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.72■□□□□ 0.43
Clns1aQ61189 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clns1aQ61189 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clns1aQ61189 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clns1aQ61189 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clns1aQ61189 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.72■□□□□ 0.43
Clns1aQ61189 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clns1aQ61189 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clns1aQ61189 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.71■□□□□ 0.43
Clns1aQ61189 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clns1aQ61189 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Clns1aQ61189 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clns1aQ61189 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.71■□□□□ 0.43
Clns1aQ61189 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clns1aQ61189 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clns1aQ61189 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clns1aQ61189 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clns1aQ61189 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clns1aQ61189 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.7■□□□□ 0.42
Clns1aQ61189 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clns1aQ61189 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clns1aQ61189 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clns1aQ61189 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clns1aQ61189 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clns1aQ61189 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clns1aQ61189 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Clns1aQ61189 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.7■□□□□ 0.42
Clns1aQ61189 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clns1aQ61189 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Clns1aQ61189 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Clns1aQ61189 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clns1aQ61189 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.69■□□□□ 0.42
Clns1aQ61189 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clns1aQ61189 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clns1aQ61189 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clns1aQ61189 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clns1aQ61189 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clns1aQ61189 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clns1aQ61189 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clns1aQ61189 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Clns1aQ61189 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clns1aQ61189 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Clns1aQ61189 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.68■□□□□ 0.42
Clns1aQ61189 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.68■□□□□ 0.42
Clns1aQ61189 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clns1aQ61189 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clns1aQ61189 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Clns1aQ61189 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Clns1aQ61189 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clns1aQ61189 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Clns1aQ61189 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms