Protein–RNA interactions for Protein: Q61120

Shc3, SHC-transforming protein 3, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc3Q61120 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shc3Q61120 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shc3Q61120 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.52■■□□□ 1.2
Shc3Q61120 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.52■■□□□ 1.2
Shc3Q61120 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.52■■□□□ 1.2
Shc3Q61120 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shc3Q61120 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shc3Q61120 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.51■■□□□ 1.19
Shc3Q61120 Cap2-205ENSMUST00000225824 1634 ntBASIC22.51■■□□□ 1.19
Shc3Q61120 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shc3Q61120 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shc3Q61120 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shc3Q61120 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shc3Q61120 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Shc3Q61120 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Shc3Q61120 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.5■■□□□ 1.19
Shc3Q61120 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.5■■□□□ 1.19
Shc3Q61120 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Shc3Q61120 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.5■■□□□ 1.19
Shc3Q61120 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Shc3Q61120 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Shc3Q61120 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shc3Q61120 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shc3Q61120 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shc3Q61120 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shc3Q61120 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Shc3Q61120 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shc3Q61120 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Shc3Q61120 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Shc3Q61120 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Shc3Q61120 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Shc3Q61120 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Shc3Q61120 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.48■■□□□ 1.19
Shc3Q61120 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.48■■□□□ 1.19
Shc3Q61120 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Shc3Q61120 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Shc3Q61120 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shc3Q61120 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Shc3Q61120 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shc3Q61120 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.47■■□□□ 1.19
Shc3Q61120 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shc3Q61120 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Shc3Q61120 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shc3Q61120 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shc3Q61120 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
Shc3Q61120 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Shc3Q61120 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shc3Q61120 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shc3Q61120 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.46■■□□□ 1.19
Shc3Q61120 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shc3Q61120 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Shc3Q61120 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shc3Q61120 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shc3Q61120 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shc3Q61120 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shc3Q61120 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shc3Q61120 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Shc3Q61120 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Shc3Q61120 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.45■■□□□ 1.18
Shc3Q61120 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.45■■□□□ 1.18
Shc3Q61120 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Shc3Q61120 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
Shc3Q61120 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Shc3Q61120 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Shc3Q61120 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Shc3Q61120 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Shc3Q61120 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Shc3Q61120 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Shc3Q61120 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Shc3Q61120 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Shc3Q61120 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Shc3Q61120 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Shc3Q61120 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.44■■□□□ 1.18
Shc3Q61120 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Shc3Q61120 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Shc3Q61120 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Shc3Q61120 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Shc3Q61120 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.43■■□□□ 1.18
Shc3Q61120 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Shc3Q61120 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Shc3Q61120 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Shc3Q61120 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.43■■□□□ 1.18
Shc3Q61120 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Shc3Q61120 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.42■■□□□ 1.18
Shc3Q61120 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Shc3Q61120 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Shc3Q61120 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Shc3Q61120 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Shc3Q61120 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Shc3Q61120 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Shc3Q61120 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Shc3Q61120 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Shc3Q61120 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shc3Q61120 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shc3Q61120 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shc3Q61120 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Shc3Q61120 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shc3Q61120 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Shc3Q61120 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shc3Q61120 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms