Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav7d-3Q5R1I1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav7d-3Q5R1I1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-3Q5R1I1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-3Q5R1I1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-3Q5R1I1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-3Q5R1I1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-3Q5R1I1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav7d-3Q5R1I1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-3Q5R1I1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-3Q5R1I1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-3Q5R1I1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-3Q5R1I1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-3Q5R1I1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-3Q5R1I1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav7d-3Q5R1I1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav7d-3Q5R1I1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-3Q5R1I1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-3Q5R1I1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-3Q5R1I1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-3Q5R1I1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-3Q5R1I1 Gm11175-201ENSMUST00000116172 543 ntBASIC15.27■□□□□ 0.04
Trav7d-3Q5R1I1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-3Q5R1I1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7d-3Q5R1I1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7d-3Q5R1I1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7d-3Q5R1I1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Trav7d-3Q5R1I1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav7d-3Q5R1I1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav7d-3Q5R1I1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-3Q5R1I1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Trav7d-3Q5R1I1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-3Q5R1I1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-3Q5R1I1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-3Q5R1I1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-3Q5R1I1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-3Q5R1I1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Mir6538-201ENSMUST00000183713 110 ntBASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7d-3Q5R1I1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-3Q5R1I1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-3Q5R1I1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav7d-3Q5R1I1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-3Q5R1I1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-3Q5R1I1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-3Q5R1I1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-3Q5R1I1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav7d-3Q5R1I1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-3Q5R1I1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-3Q5R1I1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav7d-3Q5R1I1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trav7d-3Q5R1I1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.23■□□□□ 0.03
Trav7d-3Q5R1I1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7d-3Q5R1I1 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.23■□□□□ 0.03
Trav7d-3Q5R1I1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7d-3Q5R1I1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7d-3Q5R1I1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7d-3Q5R1I1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Trav7d-3Q5R1I1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-3Q5R1I1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-3Q5R1I1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-3Q5R1I1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-3Q5R1I1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-3Q5R1I1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav7d-3Q5R1I1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Trav7d-3Q5R1I1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-3Q5R1I1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-3Q5R1I1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-3Q5R1I1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-3Q5R1I1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-3Q5R1I1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-3Q5R1I1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-3Q5R1I1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-3Q5R1I1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-3Q5R1I1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-3Q5R1I1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7d-3Q5R1I1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Trav7d-3Q5R1I1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7d-3Q5R1I1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7d-3Q5R1I1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7d-3Q5R1I1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7d-3Q5R1I1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav7d-3Q5R1I1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7d-3Q5R1I1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7d-3Q5R1I1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7d-3Q5R1I1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7d-3Q5R1I1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav7d-3Q5R1I1 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.2■□□□□ 0.02
Trav7d-3Q5R1I1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms