Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp25Q3U435 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp25Q3U435 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp25Q3U435 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Mmp25Q3U435 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp25Q3U435 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp25Q3U435 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp25Q3U435 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp25Q3U435 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp25Q3U435 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp25Q3U435 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Mmp25Q3U435 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Mmp25Q3U435 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp25Q3U435 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.72■□□□□ 0.75
Mmp25Q3U435 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.71■□□□□ 0.75
Mmp25Q3U435 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Mmp25Q3U435 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp25Q3U435 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Mmp25Q3U435 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp25Q3U435 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp25Q3U435 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.7■□□□□ 0.74
Mmp25Q3U435 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.7■□□□□ 0.74
Mmp25Q3U435 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp25Q3U435 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp25Q3U435 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp25Q3U435 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.69■□□□□ 0.74
Mmp25Q3U435 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp25Q3U435 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp25Q3U435 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp25Q3U435 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp25Q3U435 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp25Q3U435 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Mmp25Q3U435 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.69■□□□□ 0.74
Mmp25Q3U435 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp25Q3U435 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp25Q3U435 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp25Q3U435 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp25Q3U435 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp25Q3U435 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp25Q3U435 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp25Q3U435 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp25Q3U435 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.68■□□□□ 0.74
Mmp25Q3U435 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp25Q3U435 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp25Q3U435 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.68■□□□□ 0.74
Mmp25Q3U435 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp25Q3U435 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Mmp25Q3U435 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp25Q3U435 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp25Q3U435 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp25Q3U435 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Mmp25Q3U435 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp25Q3U435 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp25Q3U435 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.66■□□□□ 0.74
Mmp25Q3U435 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.66■□□□□ 0.74
Mmp25Q3U435 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp25Q3U435 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp25Q3U435 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp25Q3U435 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp25Q3U435 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Mmp25Q3U435 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp25Q3U435 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp25Q3U435 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp25Q3U435 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Mmp25Q3U435 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp25Q3U435 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp25Q3U435 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp25Q3U435 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Mmp25Q3U435 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp25Q3U435 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mmp25Q3U435 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp25Q3U435 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp25Q3U435 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp25Q3U435 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.64■□□□□ 0.73
Mmp25Q3U435 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp25Q3U435 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp25Q3U435 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp25Q3U435 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp25Q3U435 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp25Q3U435 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp25Q3U435 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp25Q3U435 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp25Q3U435 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp25Q3U435 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.63■□□□□ 0.73
Mmp25Q3U435 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.63■□□□□ 0.73
Mmp25Q3U435 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp25Q3U435 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp25Q3U435 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.62■□□□□ 0.73
Mmp25Q3U435 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Mmp25Q3U435 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Mmp25Q3U435 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.62■□□□□ 0.73
Mmp25Q3U435 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp25Q3U435 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp25Q3U435 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp25Q3U435 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp25Q3U435 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp25Q3U435 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp25Q3U435 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp25Q3U435 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp25Q3U435 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms