Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col10a1Q05306 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col10a1Q05306 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col10a1Q05306 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Col10a1Q05306 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Col10a1Q05306 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col10a1Q05306 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.27■□□□□ 0.68
Col10a1Q05306 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.27■□□□□ 0.68
Col10a1Q05306 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Col10a1Q05306 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col10a1Q05306 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col10a1Q05306 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Col10a1Q05306 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col10a1Q05306 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col10a1Q05306 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col10a1Q05306 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.26■□□□□ 0.67
Col10a1Q05306 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col10a1Q05306 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col10a1Q05306 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col10a1Q05306 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Col10a1Q05306 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col10a1Q05306 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.25■□□□□ 0.67
Col10a1Q05306 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col10a1Q05306 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.25■□□□□ 0.67
Col10a1Q05306 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col10a1Q05306 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col10a1Q05306 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col10a1Q05306 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col10a1Q05306 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col10a1Q05306 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col10a1Q05306 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col10a1Q05306 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col10a1Q05306 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col10a1Q05306 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col10a1Q05306 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col10a1Q05306 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Col10a1Q05306 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col10a1Q05306 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col10a1Q05306 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col10a1Q05306 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.23■□□□□ 0.67
Col10a1Q05306 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.23■□□□□ 0.67
Col10a1Q05306 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.23■□□□□ 0.67
Col10a1Q05306 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col10a1Q05306 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.23■□□□□ 0.67
Col10a1Q05306 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col10a1Q05306 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col10a1Q05306 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col10a1Q05306 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col10a1Q05306 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Col10a1Q05306 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col10a1Q05306 Gm10399-202ENSMUST00000202768 748 ntBASIC19.22■□□□□ 0.67
Col10a1Q05306 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.22■□□□□ 0.67
Col10a1Q05306 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col10a1Q05306 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Col10a1Q05306 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.22■□□□□ 0.67
Col10a1Q05306 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col10a1Q05306 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col10a1Q05306 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col10a1Q05306 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col10a1Q05306 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col10a1Q05306 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.21■□□□□ 0.67
Col10a1Q05306 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.21■□□□□ 0.67
Col10a1Q05306 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col10a1Q05306 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col10a1Q05306 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col10a1Q05306 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col10a1Q05306 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Col10a1Q05306 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col10a1Q05306 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col10a1Q05306 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col10a1Q05306 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.18■□□□□ 0.66
Col10a1Q05306 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col10a1Q05306 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.18■□□□□ 0.66
Col10a1Q05306 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.18■□□□□ 0.66
Col10a1Q05306 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col10a1Q05306 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col10a1Q05306 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col10a1Q05306 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col10a1Q05306 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Col10a1Q05306 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col10a1Q05306 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col10a1Q05306 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.17■□□□□ 0.66
Col10a1Q05306 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col10a1Q05306 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.17■□□□□ 0.66
Col10a1Q05306 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.17■□□□□ 0.66
Col10a1Q05306 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col10a1Q05306 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col10a1Q05306 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col10a1Q05306 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Col10a1Q05306 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col10a1Q05306 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col10a1Q05306 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.16■□□□□ 0.66
Col10a1Q05306 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Col10a1Q05306 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.16■□□□□ 0.66
Col10a1Q05306 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.16■□□□□ 0.66
Col10a1Q05306 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col10a1Q05306 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.16■□□□□ 0.66
Col10a1Q05306 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col10a1Q05306 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Col10a1Q05306 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms