Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.12■□□□□ 0.97
Thumpd3P97770 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Thumpd3P97770 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Thumpd3P97770 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Thumpd3P97770 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Thumpd3P97770 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Thumpd3P97770 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Thumpd3P97770 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Thumpd3P97770 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Thumpd3P97770 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Thumpd3P97770 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Thumpd3P97770 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Thumpd3P97770 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.11■□□□□ 0.97
Thumpd3P97770 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd3P97770 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd3P97770 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd3P97770 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd3P97770 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd3P97770 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.1■□□□□ 0.97
Thumpd3P97770 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Thumpd3P97770 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.1■□□□□ 0.97
Thumpd3P97770 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd3P97770 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Thumpd3P97770 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd3P97770 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd3P97770 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Thumpd3P97770 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Thumpd3P97770 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Thumpd3P97770 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Thumpd3P97770 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Thumpd3P97770 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Thumpd3P97770 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Thumpd3P97770 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Thumpd3P97770 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Thumpd3P97770 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Thumpd3P97770 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.08■□□□□ 0.97
Thumpd3P97770 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Thumpd3P97770 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Thumpd3P97770 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Thumpd3P97770 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Thumpd3P97770 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Thumpd3P97770 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Thumpd3P97770 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Thumpd3P97770 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Thumpd3P97770 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Thumpd3P97770 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Thumpd3P97770 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Thumpd3P97770 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.07■□□□□ 0.96
Thumpd3P97770 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Thumpd3P97770 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Thumpd3P97770 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Thumpd3P97770 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Thumpd3P97770 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Thumpd3P97770 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Thumpd3P97770 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Thumpd3P97770 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Thumpd3P97770 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Thumpd3P97770 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.06■□□□□ 0.96
Thumpd3P97770 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Thumpd3P97770 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Thumpd3P97770 Gm15546-201ENSMUST00000122095 826 ntBASIC21.05■□□□□ 0.96
Thumpd3P97770 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Thumpd3P97770 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Thumpd3P97770 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.04■□□□□ 0.96
Thumpd3P97770 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Thumpd3P97770 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Thumpd3P97770 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.04■□□□□ 0.96
Thumpd3P97770 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Thumpd3P97770 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Thumpd3P97770 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Thumpd3P97770 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
Thumpd3P97770 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Thumpd3P97770 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Thumpd3P97770 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd3P97770 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd3P97770 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Thumpd3P97770 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.03■□□□□ 0.96
Thumpd3P97770 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd3P97770 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Thumpd3P97770 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd3P97770 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Thumpd3P97770 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Thumpd3P97770 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Thumpd3P97770 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Thumpd3P97770 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Thumpd3P97770 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
Thumpd3P97770 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Thumpd3P97770 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.01■□□□□ 0.95
Thumpd3P97770 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.01■□□□□ 0.95
Thumpd3P97770 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Thumpd3P97770 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Thumpd3P97770 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.01■□□□□ 0.95
Thumpd3P97770 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.01■□□□□ 0.95
Thumpd3P97770 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Thumpd3P97770 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Thumpd3P97770 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Thumpd3P97770 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Thumpd3P97770 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Thumpd3P97770 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Thumpd3P97770 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms