Protein–RNA interactions for Protein: P51676

Ccr1l1, C-C chemokine receptor 1-like protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1l1P51676 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccr1l1P51676 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccr1l1P51676 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.91■□□□□ 0.62
Ccr1l1P51676 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccr1l1P51676 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccr1l1P51676 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccr1l1P51676 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccr1l1P51676 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Ccr1l1P51676 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccr1l1P51676 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccr1l1P51676 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccr1l1P51676 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccr1l1P51676 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccr1l1P51676 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.9■□□□□ 0.62
Ccr1l1P51676 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.9■□□□□ 0.62
Ccr1l1P51676 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccr1l1P51676 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccr1l1P51676 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccr1l1P51676 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ccr1l1P51676 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccr1l1P51676 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccr1l1P51676 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccr1l1P51676 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccr1l1P51676 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ccr1l1P51676 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccr1l1P51676 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccr1l1P51676 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccr1l1P51676 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.88■□□□□ 0.61
Ccr1l1P51676 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccr1l1P51676 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccr1l1P51676 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ccr1l1P51676 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccr1l1P51676 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ccr1l1P51676 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccr1l1P51676 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ccr1l1P51676 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccr1l1P51676 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ccr1l1P51676 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccr1l1P51676 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccr1l1P51676 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.86■□□□□ 0.61
Ccr1l1P51676 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccr1l1P51676 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.86■□□□□ 0.61
Ccr1l1P51676 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccr1l1P51676 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccr1l1P51676 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccr1l1P51676 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccr1l1P51676 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.86■□□□□ 0.61
Ccr1l1P51676 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccr1l1P51676 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccr1l1P51676 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.85■□□□□ 0.61
Ccr1l1P51676 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.85■□□□□ 0.61
Ccr1l1P51676 Gm40881-201ENSMUST00000223397 166 ntBASIC18.85■□□□□ 0.61
Ccr1l1P51676 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccr1l1P51676 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccr1l1P51676 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccr1l1P51676 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccr1l1P51676 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccr1l1P51676 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccr1l1P51676 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccr1l1P51676 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccr1l1P51676 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccr1l1P51676 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Ccr1l1P51676 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccr1l1P51676 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.84■□□□□ 0.61
Ccr1l1P51676 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccr1l1P51676 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccr1l1P51676 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccr1l1P51676 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccr1l1P51676 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccr1l1P51676 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccr1l1P51676 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccr1l1P51676 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccr1l1P51676 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccr1l1P51676 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccr1l1P51676 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccr1l1P51676 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.82■□□□□ 0.6
Ccr1l1P51676 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccr1l1P51676 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccr1l1P51676 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccr1l1P51676 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccr1l1P51676 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Etf1-202ENSMUST00000180351 108 ntBASIC18.81■□□□□ 0.6
Ccr1l1P51676 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr1l1P51676 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr1l1P51676 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.81■□□□□ 0.6
Ccr1l1P51676 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccr1l1P51676 Rps24-207ENSMUST00000224568 714 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms