Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps4bP46467 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps4bP46467 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps4bP46467 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps4bP46467 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
Vps4bP46467 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vps4bP46467 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps4bP46467 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vps4bP46467 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps4bP46467 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps4bP46467 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps4bP46467 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps4bP46467 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.16■□□□□ 0.98
Vps4bP46467 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps4bP46467 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps4bP46467 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.15■□□□□ 0.98
Vps4bP46467 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Vps4bP46467 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vps4bP46467 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.14■□□□□ 0.97
Vps4bP46467 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps4bP46467 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.13■□□□□ 0.97
Vps4bP46467 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Vps4bP46467 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
Vps4bP46467 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps4bP46467 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Vps4bP46467 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps4bP46467 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Vps4bP46467 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps4bP46467 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps4bP46467 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps4bP46467 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vps4bP46467 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Vps4bP46467 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vps4bP46467 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps4bP46467 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vps4bP46467 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps4bP46467 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Vps4bP46467 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps4bP46467 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps4bP46467 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps4bP46467 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.1■□□□□ 0.97
Vps4bP46467 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Vps4bP46467 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Vps4bP46467 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps4bP46467 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps4bP46467 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Vps4bP46467 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.09■□□□□ 0.97
Vps4bP46467 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps4bP46467 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps4bP46467 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Vps4bP46467 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Vps4bP46467 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
Vps4bP46467 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.09■□□□□ 0.97
Vps4bP46467 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps4bP46467 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
Vps4bP46467 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps4bP46467 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Vps4bP46467 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vps4bP46467 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps4bP46467 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.08■□□□□ 0.97
Vps4bP46467 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps4bP46467 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps4bP46467 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vps4bP46467 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vps4bP46467 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps4bP46467 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.07■□□□□ 0.96
Vps4bP46467 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps4bP46467 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps4bP46467 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps4bP46467 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps4bP46467 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps4bP46467 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.07■□□□□ 0.96
Vps4bP46467 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps4bP46467 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps4bP46467 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Vps4bP46467 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vps4bP46467 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps4bP46467 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps4bP46467 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vps4bP46467 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps4bP46467 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps4bP46467 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Vps4bP46467 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Vps4bP46467 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.05■□□□□ 0.96
Vps4bP46467 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.05■□□□□ 0.96
Vps4bP46467 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.05■□□□□ 0.96
Vps4bP46467 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps4bP46467 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps4bP46467 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Vps4bP46467 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps4bP46467 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vps4bP46467 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vps4bP46467 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vps4bP46467 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vps4bP46467 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Vps4bP46467 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vps4bP46467 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps4bP46467 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps4bP46467 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.03■□□□□ 0.96
Vps4bP46467 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms