Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.84■□□□□ 0.77
Nkx2-6P43688 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-6P43688 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-6P43688 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-6P43688 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-6P43688 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-6P43688 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-6P43688 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-6P43688 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-6P43688 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Nkx2-6P43688 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.83■□□□□ 0.77
Nkx2-6P43688 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-6P43688 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-6P43688 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Nkx2-6P43688 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx2-6P43688 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Nkx2-6P43688 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx2-6P43688 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx2-6P43688 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-6P43688 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nkx2-6P43688 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.82■□□□□ 0.76
Nkx2-6P43688 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Nkx2-6P43688 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-6P43688 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.81■□□□□ 0.76
Nkx2-6P43688 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-6P43688 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-6P43688 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Nkx2-6P43688 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-6P43688 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-6P43688 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Nkx2-6P43688 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.8■□□□□ 0.76
Nkx2-6P43688 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-6P43688 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.8■□□□□ 0.76
Nkx2-6P43688 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-6P43688 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-6P43688 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-6P43688 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nkx2-6P43688 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.79■□□□□ 0.76
Nkx2-6P43688 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-6P43688 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.79■□□□□ 0.76
Nkx2-6P43688 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-6P43688 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-6P43688 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.79■□□□□ 0.76
Nkx2-6P43688 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-6P43688 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-6P43688 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-6P43688 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-6P43688 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-6P43688 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.78■□□□□ 0.76
Nkx2-6P43688 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-6P43688 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-6P43688 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-6P43688 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-6P43688 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-6P43688 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-6P43688 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-6P43688 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.77■□□□□ 0.76
Nkx2-6P43688 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-6P43688 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-6P43688 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-6P43688 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Nkx2-6P43688 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nkx2-6P43688 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.76■□□□□ 0.75
Nkx2-6P43688 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-6P43688 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-6P43688 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-6P43688 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.75■□□□□ 0.75
Nkx2-6P43688 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-6P43688 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-6P43688 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-6P43688 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-6P43688 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nkx2-6P43688 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-6P43688 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-6P43688 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-6P43688 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nkx2-6P43688 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nkx2-6P43688 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nkx2-6P43688 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-6P43688 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-6P43688 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nkx2-6P43688 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.73■□□□□ 0.75
Nkx2-6P43688 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-6P43688 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-6P43688 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.73■□□□□ 0.75
Nkx2-6P43688 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-6P43688 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.72■□□□□ 0.75
Nkx2-6P43688 Gm27454-201ENSMUST00000185090 204 ntBASIC19.72■□□□□ 0.75
Nkx2-6P43688 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nkx2-6P43688 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.72■□□□□ 0.75
Nkx2-6P43688 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.72■□□□□ 0.75
Nkx2-6P43688 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nkx2-6P43688 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-6P43688 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.71■□□□□ 0.75
Nkx2-6P43688 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-6P43688 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-6P43688 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nkx2-6P43688 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-6P43688 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-6P43688 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms