Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdx2P43241 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Cdx2P43241 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdx2P43241 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdx2P43241 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.08■□□□□ 0.81
Cdx2P43241 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdx2P43241 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdx2P43241 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdx2P43241 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.07■□□□□ 0.8
Cdx2P43241 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdx2P43241 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdx2P43241 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdx2P43241 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdx2P43241 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cdx2P43241 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cdx2P43241 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.05■□□□□ 0.8
Cdx2P43241 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdx2P43241 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdx2P43241 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdx2P43241 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Cdx2P43241 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Cdx2P43241 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Cdx2P43241 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdx2P43241 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Cdx2P43241 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdx2P43241 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdx2P43241 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdx2P43241 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.05■□□□□ 0.8
Cdx2P43241 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdx2P43241 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdx2P43241 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Cdx2P43241 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.04■□□□□ 0.8
Cdx2P43241 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdx2P43241 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdx2P43241 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cdx2P43241 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdx2P43241 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdx2P43241 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdx2P43241 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdx2P43241 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdx2P43241 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdx2P43241 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdx2P43241 Gm8493-201ENSMUST00000196881 489 ntBASIC20.03■□□□□ 0.8
Cdx2P43241 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdx2P43241 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cdx2P43241 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdx2P43241 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cdx2P43241 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.02■□□□□ 0.8
Cdx2P43241 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.02■□□□□ 0.8
Cdx2P43241 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdx2P43241 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cdx2P43241 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cdx2P43241 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.01■□□□□ 0.79
Cdx2P43241 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
Cdx2P43241 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdx2P43241 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.01■□□□□ 0.79
Cdx2P43241 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cdx2P43241 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cdx2P43241 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdx2P43241 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdx2P43241 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cdx2P43241 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cdx2P43241 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20■□□□□ 0.79
Cdx2P43241 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cdx2P43241 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cdx2P43241 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdx2P43241 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdx2P43241 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.99■□□□□ 0.79
Cdx2P43241 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cdx2P43241 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.99■□□□□ 0.79
Cdx2P43241 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdx2P43241 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdx2P43241 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdx2P43241 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Cdx2P43241 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cdx2P43241 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cdx2P43241 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.98■□□□□ 0.79
Cdx2P43241 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.98■□□□□ 0.79
Cdx2P43241 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdx2P43241 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.98■□□□□ 0.79
Cdx2P43241 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.98■□□□□ 0.79
Cdx2P43241 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cdx2P43241 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Cdx2P43241 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdx2P43241 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdx2P43241 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdx2P43241 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.97■□□□□ 0.79
Cdx2P43241 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.97■□□□□ 0.79
Cdx2P43241 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cdx2P43241 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdx2P43241 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdx2P43241 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdx2P43241 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdx2P43241 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdx2P43241 Gm7143-201ENSMUST00000222811 859 ntBASIC19.96■□□□□ 0.79
Cdx2P43241 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cdx2P43241 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdx2P43241 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdx2P43241 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdx2P43241 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms