Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.54■□□□□ 0.72
RetP35546 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RetP35546 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.54■□□□□ 0.72
RetP35546 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RetP35546 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
RetP35546 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RetP35546 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RetP35546 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RetP35546 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RetP35546 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RetP35546 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RetP35546 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RetP35546 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RetP35546 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
RetP35546 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RetP35546 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RetP35546 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RetP35546 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RetP35546 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RetP35546 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RetP35546 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RetP35546 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RetP35546 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RetP35546 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.51■□□□□ 0.71
RetP35546 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RetP35546 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RetP35546 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RetP35546 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RetP35546 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RetP35546 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RetP35546 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RetP35546 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RetP35546 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RetP35546 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RetP35546 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RetP35546 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RetP35546 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RetP35546 Serp2-204ENSMUST00000228055 705 ntBASIC19.49■□□□□ 0.71
RetP35546 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RetP35546 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RetP35546 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RetP35546 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RetP35546 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RetP35546 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RetP35546 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RetP35546 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RetP35546 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.48■□□□□ 0.71
RetP35546 Gm9847-201ENSMUST00000052528 599 ntBASIC19.48■□□□□ 0.71
RetP35546 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RetP35546 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.48■□□□□ 0.71
RetP35546 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.48■□□□□ 0.71
RetP35546 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RetP35546 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RetP35546 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RetP35546 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RetP35546 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RetP35546 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.47■□□□□ 0.71
RetP35546 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.47■□□□□ 0.71
RetP35546 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RetP35546 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RetP35546 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RetP35546 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RetP35546 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RetP35546 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RetP35546 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.46■□□□□ 0.71
RetP35546 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.46■□□□□ 0.71
RetP35546 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.46■□□□□ 0.71
RetP35546 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.46■□□□□ 0.71
RetP35546 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RetP35546 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RetP35546 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RetP35546 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RetP35546 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RetP35546 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RetP35546 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RetP35546 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RetP35546 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RetP35546 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RetP35546 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RetP35546 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RetP35546 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RetP35546 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RetP35546 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RetP35546 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.43■□□□□ 0.7
RetP35546 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RetP35546 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.43■□□□□ 0.7
RetP35546 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RetP35546 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RetP35546 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RetP35546 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RetP35546 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RetP35546 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RetP35546 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.42■□□□□ 0.7
RetP35546 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RetP35546 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RetP35546 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.42■□□□□ 0.7
RetP35546 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RetP35546 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RetP35546 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RetP35546 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms