Protein–RNA interactions for Protein: P01797

Ig heavy chain V-III region U61, mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01797 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01797 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01797 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01797 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01797 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01797 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01797 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01797 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
P01797 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01797 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01797 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01797 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P01797 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01797 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01797 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01797 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01797 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
P01797 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01797 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
P01797 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.29■□□□□ 0.36
P01797 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
P01797 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
P01797 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01797 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
P01797 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01797 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.29■□□□□ 0.36
P01797 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.29■□□□□ 0.36
P01797 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01797 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.28■□□□□ 0.36
P01797 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01797 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
P01797 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01797 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01797 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.28■□□□□ 0.36
P01797 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P01797 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
P01797 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
P01797 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.28■□□□□ 0.36
P01797 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.28■□□□□ 0.36
P01797 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
P01797 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.27■□□□□ 0.36
P01797 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.27■□□□□ 0.36
P01797 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
P01797 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.27■□□□□ 0.36
P01797 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P01797 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P01797 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01797 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.26■□□□□ 0.35
P01797 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01797 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.26■□□□□ 0.35
P01797 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01797 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.26■□□□□ 0.35
P01797 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.26■□□□□ 0.35
P01797 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
P01797 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P01797 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P01797 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01797 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
P01797 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.25■□□□□ 0.35
P01797 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01797 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
P01797 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01797 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01797 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.25■□□□□ 0.35
P01797 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P01797 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.25■□□□□ 0.35
P01797 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
P01797 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
P01797 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01797 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01797 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01797 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01797 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
P01797 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01797 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
P01797 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
P01797 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P01797 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.23■□□□□ 0.35
P01797 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
P01797 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01797 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.23■□□□□ 0.35
P01797 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.23■□□□□ 0.35
P01797 Gm7417-201ENSMUST00000192950 473 ntBASIC17.23■□□□□ 0.35
P01797 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.23■□□□□ 0.35
P01797 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01797 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
P01797 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
P01797 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
P01797 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01797 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P01797 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01797 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.22■□□□□ 0.35
P01797 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms