Protein–RNA interactions for Protein: P01797

Ig heavy chain V-III region U61, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01797 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01797 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01797 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01797 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01797 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01797 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01797 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01797 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
P01797 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01797 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01797 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01797 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P01797 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01797 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01797 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01797 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01797 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
P01797 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01797 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
P01797 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.29■□□□□ 0.36
P01797 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
P01797 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
P01797 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01797 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
P01797 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01797 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.29■□□□□ 0.36
P01797 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.29■□□□□ 0.36
P01797 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01797 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.28■□□□□ 0.36
P01797 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01797 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
P01797 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01797 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01797 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.28■□□□□ 0.36
P01797 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P01797 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
P01797 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
P01797 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.28■□□□□ 0.36
P01797 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.28■□□□□ 0.36
P01797 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
P01797 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.27■□□□□ 0.36
P01797 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P01797 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.27■□□□□ 0.36
P01797 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
P01797 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.27■□□□□ 0.36
P01797 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P01797 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P01797 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01797 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.26■□□□□ 0.35
P01797 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01797 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.26■□□□□ 0.35
P01797 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01797 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.26■□□□□ 0.35
P01797 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.26■□□□□ 0.35
P01797 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
P01797 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P01797 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P01797 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01797 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
P01797 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.25■□□□□ 0.35
P01797 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01797 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
P01797 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01797 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01797 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.25■□□□□ 0.35
P01797 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P01797 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.25■□□□□ 0.35
P01797 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
P01797 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
P01797 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01797 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01797 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01797 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01797 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
P01797 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01797 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
P01797 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
P01797 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P01797 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.23■□□□□ 0.35
P01797 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
P01797 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01797 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.23■□□□□ 0.35
P01797 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.23■□□□□ 0.35
P01797 Gm7417-201ENSMUST00000192950 473 ntBASIC17.23■□□□□ 0.35
P01797 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.23■□□□□ 0.35
P01797 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01797 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
P01797 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
P01797 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
P01797 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01797 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P01797 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01797 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.22■□□□□ 0.35
P01797 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms