Protein–RNA interactions for Protein: O35114

Scarb2, Lysosome membrane protein 2, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2O35114 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.47■□□□□ 0.71
Scarb2O35114 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.47■□□□□ 0.71
Scarb2O35114 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scarb2O35114 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scarb2O35114 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scarb2O35114 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.47■□□□□ 0.71
Scarb2O35114 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.47■□□□□ 0.71
Scarb2O35114 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Scarb2O35114 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scarb2O35114 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Scarb2O35114 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scarb2O35114 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Scarb2O35114 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scarb2O35114 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.46■□□□□ 0.71
Scarb2O35114 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scarb2O35114 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scarb2O35114 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scarb2O35114 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
Scarb2O35114 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarb2O35114 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Scarb2O35114 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Scarb2O35114 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarb2O35114 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarb2O35114 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarb2O35114 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarb2O35114 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scarb2O35114 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scarb2O35114 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarb2O35114 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scarb2O35114 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.44■□□□□ 0.7
Scarb2O35114 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scarb2O35114 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scarb2O35114 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.44■□□□□ 0.7
Scarb2O35114 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scarb2O35114 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Scarb2O35114 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.43■□□□□ 0.7
Scarb2O35114 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.43■□□□□ 0.7
Scarb2O35114 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Scarb2O35114 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Scarb2O35114 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scarb2O35114 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scarb2O35114 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scarb2O35114 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scarb2O35114 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarb2O35114 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Scarb2O35114 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarb2O35114 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Scarb2O35114 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Scarb2O35114 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarb2O35114 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarb2O35114 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.42■□□□□ 0.7
Scarb2O35114 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarb2O35114 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarb2O35114 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Scarb2O35114 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarb2O35114 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.41■□□□□ 0.7
Scarb2O35114 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarb2O35114 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.41■□□□□ 0.7
Scarb2O35114 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Scarb2O35114 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarb2O35114 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scarb2O35114 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scarb2O35114 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarb2O35114 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarb2O35114 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Scarb2O35114 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.4■□□□□ 0.7
Scarb2O35114 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scarb2O35114 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scarb2O35114 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarb2O35114 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scarb2O35114 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.4■□□□□ 0.7
Scarb2O35114 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarb2O35114 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarb2O35114 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarb2O35114 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scarb2O35114 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scarb2O35114 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Scarb2O35114 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scarb2O35114 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scarb2O35114 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scarb2O35114 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scarb2O35114 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scarb2O35114 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scarb2O35114 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Scarb2O35114 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scarb2O35114 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Scarb2O35114 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scarb2O35114 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.38■□□□□ 0.69
Scarb2O35114 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scarb2O35114 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scarb2O35114 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scarb2O35114 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scarb2O35114 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scarb2O35114 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.37■□□□□ 0.69
Scarb2O35114 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Scarb2O35114 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scarb2O35114 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scarb2O35114 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scarb2O35114 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scarb2O35114 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms