Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.03■□□□□ 0.64
Shisa8J3QNX5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shisa8J3QNX5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shisa8J3QNX5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Shisa8J3QNX5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shisa8J3QNX5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shisa8J3QNX5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.02■□□□□ 0.64
Shisa8J3QNX5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Shisa8J3QNX5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Shisa8J3QNX5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shisa8J3QNX5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shisa8J3QNX5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shisa8J3QNX5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shisa8J3QNX5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shisa8J3QNX5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Shisa8J3QNX5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shisa8J3QNX5 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.01■□□□□ 0.63
Shisa8J3QNX5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shisa8J3QNX5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shisa8J3QNX5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shisa8J3QNX5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shisa8J3QNX5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Shisa8J3QNX5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Shisa8J3QNX5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Shisa8J3QNX5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shisa8J3QNX5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19■□□□□ 0.63
Shisa8J3QNX5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19■□□□□ 0.63
Shisa8J3QNX5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Shisa8J3QNX5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19■□□□□ 0.63
Shisa8J3QNX5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19■□□□□ 0.63
Shisa8J3QNX5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shisa8J3QNX5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shisa8J3QNX5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Shisa8J3QNX5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shisa8J3QNX5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19■□□□□ 0.63
Shisa8J3QNX5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shisa8J3QNX5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Shisa8J3QNX5 Golph3-202ENSMUST00000226517 2359 ntBASIC18.99■□□□□ 0.63
Shisa8J3QNX5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.99■□□□□ 0.63
Shisa8J3QNX5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shisa8J3QNX5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Shisa8J3QNX5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.99■□□□□ 0.63
Shisa8J3QNX5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Shisa8J3QNX5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shisa8J3QNX5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shisa8J3QNX5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shisa8J3QNX5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shisa8J3QNX5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shisa8J3QNX5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shisa8J3QNX5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Shisa8J3QNX5 Gm6311-201ENSMUST00000073790 878 ntBASIC18.98■□□□□ 0.63
Shisa8J3QNX5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Shisa8J3QNX5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shisa8J3QNX5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shisa8J3QNX5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shisa8J3QNX5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Shisa8J3QNX5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Shisa8J3QNX5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shisa8J3QNX5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shisa8J3QNX5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Shisa8J3QNX5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shisa8J3QNX5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Shisa8J3QNX5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shisa8J3QNX5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shisa8J3QNX5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shisa8J3QNX5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shisa8J3QNX5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa8J3QNX5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa8J3QNX5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa8J3QNX5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Shisa8J3QNX5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa8J3QNX5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa8J3QNX5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa8J3QNX5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Shisa8J3QNX5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa8J3QNX5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa8J3QNX5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa8J3QNX5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Shisa8J3QNX5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa8J3QNX5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa8J3QNX5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Shisa8J3QNX5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa8J3QNX5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa8J3QNX5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa8J3QNX5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa8J3QNX5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa8J3QNX5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.94■□□□□ 0.62
Shisa8J3QNX5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa8J3QNX5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Shisa8J3QNX5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Shisa8J3QNX5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Shisa8J3QNX5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shisa8J3QNX5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Shisa8J3QNX5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shisa8J3QNX5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Shisa8J3QNX5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shisa8J3QNX5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Shisa8J3QNX5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Shisa8J3QNX5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Shisa8J3QNX5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms