Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm7291-201ENSMUST00000199147 382 ntBASIC20.32■□□□□ 0.84
Colca2F8VPY8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.32■□□□□ 0.84
Colca2F8VPY8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Colca2F8VPY8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Colca2F8VPY8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Colca2F8VPY8 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.31■□□□□ 0.84
Colca2F8VPY8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Colca2F8VPY8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Colca2F8VPY8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.31■□□□□ 0.84
Colca2F8VPY8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Colca2F8VPY8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Colca2F8VPY8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Colca2F8VPY8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Colca2F8VPY8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.3■□□□□ 0.84
Colca2F8VPY8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Colca2F8VPY8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Colca2F8VPY8 Gm12251-201ENSMUST00000117893 792 ntBASIC20.29■□□□□ 0.84
Colca2F8VPY8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Colca2F8VPY8 Gm7143-201ENSMUST00000222811 859 ntBASIC20.29■□□□□ 0.84
Colca2F8VPY8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Colca2F8VPY8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Colca2F8VPY8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Colca2F8VPY8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Colca2F8VPY8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Colca2F8VPY8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Colca2F8VPY8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Colca2F8VPY8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Colca2F8VPY8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Colca2F8VPY8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Colca2F8VPY8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.28■□□□□ 0.84
Colca2F8VPY8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.28■□□□□ 0.84
Colca2F8VPY8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Colca2F8VPY8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Colca2F8VPY8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Colca2F8VPY8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.27■□□□□ 0.84
Colca2F8VPY8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.27■□□□□ 0.84
Colca2F8VPY8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.27■□□□□ 0.84
Colca2F8VPY8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Colca2F8VPY8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Colca2F8VPY8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Colca2F8VPY8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.26■□□□□ 0.83
Colca2F8VPY8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Colca2F8VPY8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Colca2F8VPY8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Colca2F8VPY8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Colca2F8VPY8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.25■□□□□ 0.83
Colca2F8VPY8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Colca2F8VPY8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Colca2F8VPY8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Colca2F8VPY8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Colca2F8VPY8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Colca2F8VPY8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.24■□□□□ 0.83
Colca2F8VPY8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Colca2F8VPY8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.24■□□□□ 0.83
Colca2F8VPY8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Colca2F8VPY8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Colca2F8VPY8 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.23■□□□□ 0.83
Colca2F8VPY8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Colca2F8VPY8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Colca2F8VPY8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Colca2F8VPY8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.23■□□□□ 0.83
Colca2F8VPY8 Gm10493-201ENSMUST00000097270 612 ntBASIC20.23■□□□□ 0.83
Colca2F8VPY8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Colca2F8VPY8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Colca2F8VPY8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Colca2F8VPY8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Colca2F8VPY8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Colca2F8VPY8 Gm27405-201ENSMUST00000184201 112 ntBASIC20.22■□□□□ 0.83
Colca2F8VPY8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.22■□□□□ 0.83
Colca2F8VPY8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Colca2F8VPY8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Colca2F8VPY8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Colca2F8VPY8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Colca2F8VPY8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Colca2F8VPY8 Gm26571-201ENSMUST00000181399 666 ntBASIC20.21■□□□□ 0.83
Colca2F8VPY8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Colca2F8VPY8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Colca2F8VPY8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Colca2F8VPY8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Colca2F8VPY8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Colca2F8VPY8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Colca2F8VPY8 Gm26833-201ENSMUST00000180899 440 ntBASIC20.2■□□□□ 0.82
Colca2F8VPY8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Colca2F8VPY8 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.19■□□□□ 0.82
Colca2F8VPY8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Colca2F8VPY8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Colca2F8VPY8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Colca2F8VPY8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.18■□□□□ 0.82
Colca2F8VPY8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Colca2F8VPY8 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.18■□□□□ 0.82
Colca2F8VPY8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Colca2F8VPY8 Gm10849-201ENSMUST00000100397 618 ntBASIC20.17■□□□□ 0.82
Colca2F8VPY8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.17■□□□□ 0.82
Colca2F8VPY8 Gm42569-201ENSMUST00000200539 472 ntBASIC20.17■□□□□ 0.82
Colca2F8VPY8 Gm43060-201ENSMUST00000200621 289 ntBASIC20.17■□□□□ 0.82
Colca2F8VPY8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.17■□□□□ 0.82
Colca2F8VPY8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Colca2F8VPY8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Colca2F8VPY8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Colca2F8VPY8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms