Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Nsd1-206ENSMUST00000224918 1001 ntBASIC12.24□□□□□ -0.45
Herc1E9PZP8 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.24□□□□□ -0.45
Herc1E9PZP8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.23□□□□□ -0.45
Herc1E9PZP8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.23□□□□□ -0.45
Herc1E9PZP8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Gm9870-201ENSMUST00000063874 645 ntBASIC12.23□□□□□ -0.45
Herc1E9PZP8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.23□□□□□ -0.45
Herc1E9PZP8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Herc1E9PZP8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Herc1E9PZP8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.22□□□□□ -0.45
Herc1E9PZP8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.21□□□□□ -0.45
Herc1E9PZP8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Herc1E9PZP8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Herc1E9PZP8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.21□□□□□ -0.46
Herc1E9PZP8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Herc1E9PZP8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC12.21□□□□□ -0.46
Herc1E9PZP8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.2□□□□□ -0.46
Herc1E9PZP8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.2□□□□□ -0.46
Herc1E9PZP8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.2□□□□□ -0.46
Herc1E9PZP8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC12.19□□□□□ -0.46
Herc1E9PZP8 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.19□□□□□ -0.46
Herc1E9PZP8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.19□□□□□ -0.46
Herc1E9PZP8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Gm7199-201ENSMUST00000118327 1485 ntBASIC12.18□□□□□ -0.46
Herc1E9PZP8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms