Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc1E9PZP8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Nsd1-206ENSMUST00000224918 1001 ntBASIC12.24□□□□□ -0.45
Herc1E9PZP8 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.24□□□□□ -0.45
Herc1E9PZP8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.24□□□□□ -0.45
Herc1E9PZP8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.23□□□□□ -0.45
Herc1E9PZP8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.23□□□□□ -0.45
Herc1E9PZP8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Gm9870-201ENSMUST00000063874 645 ntBASIC12.23□□□□□ -0.45
Herc1E9PZP8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.23□□□□□ -0.45
Herc1E9PZP8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc1E9PZP8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Herc1E9PZP8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.22□□□□□ -0.45
Herc1E9PZP8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Herc1E9PZP8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.22□□□□□ -0.45
Herc1E9PZP8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.21□□□□□ -0.45
Herc1E9PZP8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Herc1E9PZP8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Herc1E9PZP8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Herc1E9PZP8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.21□□□□□ -0.46
Herc1E9PZP8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Herc1E9PZP8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC12.21□□□□□ -0.46
Herc1E9PZP8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.2□□□□□ -0.46
Herc1E9PZP8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.2□□□□□ -0.46
Herc1E9PZP8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.2□□□□□ -0.46
Herc1E9PZP8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Herc1E9PZP8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC12.19□□□□□ -0.46
Herc1E9PZP8 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.19□□□□□ -0.46
Herc1E9PZP8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Herc1E9PZP8 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.19□□□□□ -0.46
Herc1E9PZP8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Gm7199-201ENSMUST00000118327 1485 ntBASIC12.18□□□□□ -0.46
Herc1E9PZP8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.18□□□□□ -0.46
Herc1E9PZP8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms