Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a5A6H584 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a5A6H584 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.25■□□□□ 0.19
Col6a5A6H584 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a5A6H584 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a5A6H584 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a5A6H584 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col6a5A6H584 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.24■□□□□ 0.19
Col6a5A6H584 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a5A6H584 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a5A6H584 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.24■□□□□ 0.19
Col6a5A6H584 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.24■□□□□ 0.19
Col6a5A6H584 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a5A6H584 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a5A6H584 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a5A6H584 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.23■□□□□ 0.19
Col6a5A6H584 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.23■□□□□ 0.19
Col6a5A6H584 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a5A6H584 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.23■□□□□ 0.19
Col6a5A6H584 Gm40848-201ENSMUST00000221998 324 ntBASIC16.23■□□□□ 0.19
Col6a5A6H584 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a5A6H584 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a5A6H584 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.23■□□□□ 0.19
Col6a5A6H584 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.23■□□□□ 0.19
Col6a5A6H584 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a5A6H584 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a5A6H584 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a5A6H584 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.22■□□□□ 0.19
Col6a5A6H584 Gm10653-202ENSMUST00000139570 835 ntBASIC16.22■□□□□ 0.19
Col6a5A6H584 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a5A6H584 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.21■□□□□ 0.19
Col6a5A6H584 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a5A6H584 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a5A6H584 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.21■□□□□ 0.19
Col6a5A6H584 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Col6a5A6H584 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.21■□□□□ 0.19
Col6a5A6H584 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Col6a5A6H584 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a5A6H584 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col6a5A6H584 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.2■□□□□ 0.18
Col6a5A6H584 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.2■□□□□ 0.18
Col6a5A6H584 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a5A6H584 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Col6a5A6H584 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.2■□□□□ 0.18
Col6a5A6H584 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a5A6H584 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Col6a5A6H584 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.19■□□□□ 0.18
Col6a5A6H584 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a5A6H584 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a5A6H584 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Col6a5A6H584 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a5A6H584 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a5A6H584 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Col6a5A6H584 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a5A6H584 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.18■□□□□ 0.18
Col6a5A6H584 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a5A6H584 Gm7143-201ENSMUST00000222811 859 ntBASIC16.18■□□□□ 0.18
Col6a5A6H584 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Col6a5A6H584 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a5A6H584 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a5A6H584 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a5A6H584 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
Col6a5A6H584 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a5A6H584 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a5A6H584 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a5A6H584 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a5A6H584 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a5A6H584 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.16■□□□□ 0.18
Col6a5A6H584 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a5A6H584 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a5A6H584 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a5A6H584 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Col6a5A6H584 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a5A6H584 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.15■□□□□ 0.18
Col6a5A6H584 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a5A6H584 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a5A6H584 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Col6a5A6H584 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.15■□□□□ 0.18
Col6a5A6H584 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a5A6H584 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Col6a5A6H584 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a5A6H584 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a5A6H584 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a5A6H584 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Col6a5A6H584 Gm9870-201ENSMUST00000063874 645 ntBASIC16.14■□□□□ 0.17
Col6a5A6H584 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC16.14■□□□□ 0.17
Col6a5A6H584 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a5A6H584 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Col6a5A6H584 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a5A6H584 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a5A6H584 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a5A6H584 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a5A6H584 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a5A6H584 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a5A6H584 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a5A6H584 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Col6a5A6H584 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a5A6H584 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a5A6H584 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.13■□□□□ 0.17
Col6a5A6H584 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms