Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Smim17A0A504 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.9■□□□□ 0.62
Smim17A0A504 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smim17A0A504 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Smim17A0A504 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smim17A0A504 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smim17A0A504 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smim17A0A504 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smim17A0A504 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smim17A0A504 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Smim17A0A504 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smim17A0A504 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.89■□□□□ 0.61
Smim17A0A504 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Smim17A0A504 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smim17A0A504 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smim17A0A504 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smim17A0A504 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smim17A0A504 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
Smim17A0A504 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smim17A0A504 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smim17A0A504 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smim17A0A504 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smim17A0A504 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.87■□□□□ 0.61
Smim17A0A504 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.87■□□□□ 0.61
Smim17A0A504 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.87■□□□□ 0.61
Smim17A0A504 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smim17A0A504 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smim17A0A504 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smim17A0A504 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.87■□□□□ 0.61
Smim17A0A504 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smim17A0A504 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim17A0A504 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Smim17A0A504 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.86■□□□□ 0.61
Smim17A0A504 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.86■□□□□ 0.61
Smim17A0A504 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim17A0A504 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim17A0A504 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim17A0A504 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim17A0A504 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim17A0A504 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim17A0A504 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim17A0A504 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim17A0A504 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smim17A0A504 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Smim17A0A504 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smim17A0A504 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smim17A0A504 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smim17A0A504 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.84■□□□□ 0.61
Smim17A0A504 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smim17A0A504 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smim17A0A504 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smim17A0A504 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smim17A0A504 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.84■□□□□ 0.61
Smim17A0A504 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smim17A0A504 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Smim17A0A504 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smim17A0A504 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Smim17A0A504 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim17A0A504 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.82■□□□□ 0.6
Smim17A0A504 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim17A0A504 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim17A0A504 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Smim17A0A504 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim17A0A504 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Smim17A0A504 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim17A0A504 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim17A0A504 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smim17A0A504 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim17A0A504 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim17A0A504 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim17A0A504 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smim17A0A504 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smim17A0A504 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smim17A0A504 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smim17A0A504 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smim17A0A504 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smim17A0A504 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.81■□□□□ 0.6
Smim17A0A504 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smim17A0A504 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.81■□□□□ 0.6
Smim17A0A504 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smim17A0A504 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smim17A0A504 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smim17A0A504 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smim17A0A504 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smim17A0A504 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smim17A0A504 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smim17A0A504 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.79■□□□□ 0.6
Smim17A0A504 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smim17A0A504 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim17A0A504 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim17A0A504 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smim17A0A504 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim17A0A504 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim17A0A504 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smim17A0A504 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim17A0A504 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim17A0A504 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smim17A0A504 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Smim17A0A504 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Smim17A0A504 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms