Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav15d-2-dv6d-2A0A0G2JGQ7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.34■□□□□ 0.53
Trav15d-2-dv6d-2A0A0G2JGQ7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Trav15d-2-dv6d-2A0A0G2JGQ7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav15d-2-dv6d-2A0A0G2JGQ7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10420-201ENSMUST00000121713 882 ntBASIC18.33■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.32■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Mir6538-201ENSMUST00000183713 110 ntBASIC18.32■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.32■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.31■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.3■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.29■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.27■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.25■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms