Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.17■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav9n-2A0A0G2JDP3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav9n-2A0A0G2JDP3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.15■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9n-2A0A0G2JDP3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.14■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Gm45444-201ENSMUST00000211394 898 ntBASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9n-2A0A0G2JDP3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms