Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.59■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.59■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.58■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.58■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.58■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.58■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.57■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv4-50A0A0B4J1J0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.55■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv4-50A0A0B4J1J0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.54■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.53■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.53■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv4-50A0A0B4J1J0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv4-50A0A0B4J1J0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Gm5921-201ENSMUST00000075898 882 ntBASIC17.52■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv4-50A0A0B4J1J0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv4-50A0A0B4J1J0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.52■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Gm13238-201ENSMUST00000117655 780 ntBASIC17.51■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Igkv4-50A0A0B4J1J0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 215.2 ms