Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.57■□□□□ 0.24
Trav17A0A075B655 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav17A0A075B655 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav17A0A075B655 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav17A0A075B655 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav17A0A075B655 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav17A0A075B655 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav17A0A075B655 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Trav17A0A075B655 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav17A0A075B655 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav17A0A075B655 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trav17A0A075B655 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav17A0A075B655 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav17A0A075B655 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav17A0A075B655 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav17A0A075B655 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav17A0A075B655 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav17A0A075B655 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav17A0A075B655 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav17A0A075B655 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav17A0A075B655 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav17A0A075B655 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav17A0A075B655 Gm6311-201ENSMUST00000073790 878 ntBASIC16.55■□□□□ 0.24
Trav17A0A075B655 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav17A0A075B655 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav17A0A075B655 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav17A0A075B655 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav17A0A075B655 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav17A0A075B655 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Trav17A0A075B655 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav17A0A075B655 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav17A0A075B655 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trav17A0A075B655 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav17A0A075B655 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav17A0A075B655 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav17A0A075B655 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav17A0A075B655 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.54■□□□□ 0.24
Trav17A0A075B655 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav17A0A075B655 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.54■□□□□ 0.24
Trav17A0A075B655 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav17A0A075B655 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav17A0A075B655 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav17A0A075B655 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav17A0A075B655 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav17A0A075B655 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav17A0A075B655 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav17A0A075B655 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav17A0A075B655 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav17A0A075B655 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav17A0A075B655 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav17A0A075B655 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav17A0A075B655 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav17A0A075B655 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav17A0A075B655 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.52■□□□□ 0.24
Trav17A0A075B655 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav17A0A075B655 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.52■□□□□ 0.23
Trav17A0A075B655 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav17A0A075B655 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav17A0A075B655 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav17A0A075B655 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav17A0A075B655 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav17A0A075B655 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav17A0A075B655 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav17A0A075B655 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav17A0A075B655 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
Trav17A0A075B655 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav17A0A075B655 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav17A0A075B655 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.51■□□□□ 0.23
Trav17A0A075B655 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Trav17A0A075B655 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav17A0A075B655 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav17A0A075B655 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav17A0A075B655 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav17A0A075B655 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav17A0A075B655 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav17A0A075B655 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav17A0A075B655 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav17A0A075B655 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav17A0A075B655 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav17A0A075B655 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav17A0A075B655 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav17A0A075B655 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav17A0A075B655 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav17A0A075B655 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav17A0A075B655 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav17A0A075B655 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav17A0A075B655 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.48■□□□□ 0.23
Trav17A0A075B655 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trav17A0A075B655 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.48■□□□□ 0.23
Trav17A0A075B655 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.48■□□□□ 0.23
Trav17A0A075B655 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav17A0A075B655 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav17A0A075B655 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav17A0A075B655 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav17A0A075B655 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav17A0A075B655 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav17A0A075B655 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav17A0A075B655 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav17A0A075B655 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav17A0A075B655 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms