Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trav10A0A075B642 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trav10A0A075B642 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Trav10A0A075B642 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trav10A0A075B642 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav10A0A075B642 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav10A0A075B642 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav10A0A075B642 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.54■□□□□ 0.56
Trav10A0A075B642 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.54■□□□□ 0.56
Trav10A0A075B642 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav10A0A075B642 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav10A0A075B642 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav10A0A075B642 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav10A0A075B642 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav10A0A075B642 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trav10A0A075B642 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trav10A0A075B642 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav10A0A075B642 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav10A0A075B642 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.53■□□□□ 0.56
Trav10A0A075B642 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trav10A0A075B642 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
Trav10A0A075B642 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav10A0A075B642 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Trav10A0A075B642 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav10A0A075B642 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trav10A0A075B642 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav10A0A075B642 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav10A0A075B642 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav10A0A075B642 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav10A0A075B642 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.52■□□□□ 0.56
Trav10A0A075B642 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Trav10A0A075B642 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav10A0A075B642 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav10A0A075B642 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav10A0A075B642 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Trav10A0A075B642 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trav10A0A075B642 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav10A0A075B642 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav10A0A075B642 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav10A0A075B642 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav10A0A075B642 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav10A0A075B642 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav10A0A075B642 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav10A0A075B642 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav10A0A075B642 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav10A0A075B642 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav10A0A075B642 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Trav10A0A075B642 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav10A0A075B642 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav10A0A075B642 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav10A0A075B642 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trav10A0A075B642 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav10A0A075B642 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trav10A0A075B642 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav10A0A075B642 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav10A0A075B642 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav10A0A075B642 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav10A0A075B642 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav10A0A075B642 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav10A0A075B642 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav10A0A075B642 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Trav10A0A075B642 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav10A0A075B642 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav10A0A075B642 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav10A0A075B642 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav10A0A075B642 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Trav10A0A075B642 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trav10A0A075B642 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.48■□□□□ 0.55
Trav10A0A075B642 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav10A0A075B642 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav10A0A075B642 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.47■□□□□ 0.55
Trav10A0A075B642 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav10A0A075B642 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav10A0A075B642 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav10A0A075B642 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav10A0A075B642 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav10A0A075B642 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav10A0A075B642 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.47■□□□□ 0.55
Trav10A0A075B642 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.47■□□□□ 0.55
Trav10A0A075B642 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trav10A0A075B642 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav10A0A075B642 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav10A0A075B642 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav10A0A075B642 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav10A0A075B642 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav10A0A075B642 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav10A0A075B642 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav10A0A075B642 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav10A0A075B642 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav10A0A075B642 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trav10A0A075B642 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.45■□□□□ 0.54
Trav10A0A075B642 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav10A0A075B642 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav10A0A075B642 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav10A0A075B642 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav10A0A075B642 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav10A0A075B642 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav10A0A075B642 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Trav10A0A075B642 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.45■□□□□ 0.54
Trav10A0A075B642 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms