Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav5-1A0A075B5Z7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Trav5-1A0A075B5Z7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav5-1A0A075B5Z7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav5-1A0A075B5Z7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Trav5-1A0A075B5Z7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav5-1A0A075B5Z7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav5-1A0A075B5Z7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav5-1A0A075B5Z7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav5-1A0A075B5Z7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trav5-1A0A075B5Z7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav5-1A0A075B5Z7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav5-1A0A075B5Z7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18■□□□□ 0.47
Trav5-1A0A075B5Z7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav5-1A0A075B5Z7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav5-1A0A075B5Z7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18■□□□□ 0.47
Trav5-1A0A075B5Z7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18■□□□□ 0.47
Trav5-1A0A075B5Z7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav5-1A0A075B5Z7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
Trav5-1A0A075B5Z7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav5-1A0A075B5Z7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav5-1A0A075B5Z7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav5-1A0A075B5Z7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trav5-1A0A075B5Z7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav5-1A0A075B5Z7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav5-1A0A075B5Z7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav5-1A0A075B5Z7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav5-1A0A075B5Z7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav5-1A0A075B5Z7 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.99■□□□□ 0.47
Trav5-1A0A075B5Z7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav5-1A0A075B5Z7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav5-1A0A075B5Z7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.98■□□□□ 0.47
Trav5-1A0A075B5Z7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav5-1A0A075B5Z7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav5-1A0A075B5Z7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav5-1A0A075B5Z7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav5-1A0A075B5Z7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav5-1A0A075B5Z7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav5-1A0A075B5Z7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav5-1A0A075B5Z7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav5-1A0A075B5Z7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav5-1A0A075B5Z7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trav5-1A0A075B5Z7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav5-1A0A075B5Z7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav5-1A0A075B5Z7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.97■□□□□ 0.47
Trav5-1A0A075B5Z7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav5-1A0A075B5Z7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav5-1A0A075B5Z7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trav5-1A0A075B5Z7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav5-1A0A075B5Z7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav5-1A0A075B5Z7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav5-1A0A075B5Z7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trav5-1A0A075B5Z7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav5-1A0A075B5Z7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav5-1A0A075B5Z7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.96■□□□□ 0.47
Trav5-1A0A075B5Z7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav5-1A0A075B5Z7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav5-1A0A075B5Z7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav5-1A0A075B5Z7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trav5-1A0A075B5Z7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5-1A0A075B5Z7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5-1A0A075B5Z7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5-1A0A075B5Z7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav5-1A0A075B5Z7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5-1A0A075B5Z7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5-1A0A075B5Z7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5-1A0A075B5Z7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav5-1A0A075B5Z7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav5-1A0A075B5Z7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav5-1A0A075B5Z7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5-1A0A075B5Z7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5-1A0A075B5Z7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5-1A0A075B5Z7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5-1A0A075B5Z7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5-1A0A075B5Z7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5-1A0A075B5Z7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.94■□□□□ 0.46
Trav5-1A0A075B5Z7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5-1A0A075B5Z7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5-1A0A075B5Z7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav5-1A0A075B5Z7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5-1A0A075B5Z7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav5-1A0A075B5Z7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5-1A0A075B5Z7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5-1A0A075B5Z7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5-1A0A075B5Z7 Gm12922-201ENSMUST00000120626 809 ntBASIC17.93■□□□□ 0.46
Trav5-1A0A075B5Z7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav5-1A0A075B5Z7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav5-1A0A075B5Z7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav5-1A0A075B5Z7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav5-1A0A075B5Z7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5-1A0A075B5Z7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5-1A0A075B5Z7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5-1A0A075B5Z7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5-1A0A075B5Z7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trav5-1A0A075B5Z7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5-1A0A075B5Z7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5-1A0A075B5Z7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5-1A0A075B5Z7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav5-1A0A075B5Z7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav5-1A0A075B5Z7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms