Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn13Q9Z0S4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.73■□□□□ 0.59
Cldn13Q9Z0S4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn13Q9Z0S4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn13Q9Z0S4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Cldn13Q9Z0S4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cldn13Q9Z0S4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn13Q9Z0S4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn13Q9Z0S4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn13Q9Z0S4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn13Q9Z0S4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn13Q9Z0S4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cldn13Q9Z0S4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn13Q9Z0S4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn13Q9Z0S4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn13Q9Z0S4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn13Q9Z0S4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Cldn13Q9Z0S4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cldn13Q9Z0S4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn13Q9Z0S4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn13Q9Z0S4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.69■□□□□ 0.58
Cldn13Q9Z0S4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn13Q9Z0S4 Gm15546-201ENSMUST00000122095 826 ntBASIC18.69■□□□□ 0.58
Cldn13Q9Z0S4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn13Q9Z0S4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn13Q9Z0S4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn13Q9Z0S4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.69■□□□□ 0.58
Cldn13Q9Z0S4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn13Q9Z0S4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn13Q9Z0S4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn13Q9Z0S4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn13Q9Z0S4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn13Q9Z0S4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.68■□□□□ 0.58
Cldn13Q9Z0S4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn13Q9Z0S4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cldn13Q9Z0S4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.68■□□□□ 0.58
Cldn13Q9Z0S4 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.67■□□□□ 0.58
Cldn13Q9Z0S4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn13Q9Z0S4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn13Q9Z0S4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn13Q9Z0S4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn13Q9Z0S4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn13Q9Z0S4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn13Q9Z0S4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn13Q9Z0S4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn13Q9Z0S4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cldn13Q9Z0S4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn13Q9Z0S4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cldn13Q9Z0S4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn13Q9Z0S4 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.66■□□□□ 0.58
Cldn13Q9Z0S4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cldn13Q9Z0S4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn13Q9Z0S4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn13Q9Z0S4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn13Q9Z0S4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Cldn13Q9Z0S4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn13Q9Z0S4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.65■□□□□ 0.58
Cldn13Q9Z0S4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cldn13Q9Z0S4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn13Q9Z0S4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cldn13Q9Z0S4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn13Q9Z0S4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn13Q9Z0S4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cldn13Q9Z0S4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.64■□□□□ 0.57
Cldn13Q9Z0S4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cldn13Q9Z0S4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn13Q9Z0S4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn13Q9Z0S4 Gm15820-201ENSMUST00000201566 728 ntBASIC18.64■□□□□ 0.57
Cldn13Q9Z0S4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.64■□□□□ 0.57
Cldn13Q9Z0S4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cldn13Q9Z0S4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cldn13Q9Z0S4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn13Q9Z0S4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn13Q9Z0S4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn13Q9Z0S4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn13Q9Z0S4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn13Q9Z0S4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn13Q9Z0S4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cldn13Q9Z0S4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cldn13Q9Z0S4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn13Q9Z0S4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cldn13Q9Z0S4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cldn13Q9Z0S4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn13Q9Z0S4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cldn13Q9Z0S4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn13Q9Z0S4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn13Q9Z0S4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms