Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.46■□□□□ 0.71
Cdh20Q9Z0M3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh20Q9Z0M3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh20Q9Z0M3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.45■□□□□ 0.7
Cdh20Q9Z0M3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.45■□□□□ 0.7
Cdh20Q9Z0M3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh20Q9Z0M3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh20Q9Z0M3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.45■□□□□ 0.7
Cdh20Q9Z0M3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.45■□□□□ 0.7
Cdh20Q9Z0M3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh20Q9Z0M3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh20Q9Z0M3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cdh20Q9Z0M3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh20Q9Z0M3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh20Q9Z0M3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh20Q9Z0M3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh20Q9Z0M3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh20Q9Z0M3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.44■□□□□ 0.7
Cdh20Q9Z0M3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh20Q9Z0M3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cdh20Q9Z0M3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh20Q9Z0M3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh20Q9Z0M3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh20Q9Z0M3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh20Q9Z0M3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdh20Q9Z0M3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.43■□□□□ 0.7
Cdh20Q9Z0M3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh20Q9Z0M3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh20Q9Z0M3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh20Q9Z0M3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cdh20Q9Z0M3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Gm45444-201ENSMUST00000211394 898 ntBASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh20Q9Z0M3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cdh20Q9Z0M3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh20Q9Z0M3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh20Q9Z0M3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cdh20Q9Z0M3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cdh20Q9Z0M3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh20Q9Z0M3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.41■□□□□ 0.7
Cdh20Q9Z0M3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh20Q9Z0M3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh20Q9Z0M3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Cdh20Q9Z0M3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh20Q9Z0M3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh20Q9Z0M3 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.4■□□□□ 0.7
Cdh20Q9Z0M3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh20Q9Z0M3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cdh20Q9Z0M3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cdh20Q9Z0M3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh20Q9Z0M3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh20Q9Z0M3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh20Q9Z0M3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh20Q9Z0M3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh20Q9Z0M3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cdh20Q9Z0M3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh20Q9Z0M3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh20Q9Z0M3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh20Q9Z0M3 Gm5921-201ENSMUST00000075898 882 ntBASIC19.39■□□□□ 0.69
Cdh20Q9Z0M3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.39■□□□□ 0.69
Cdh20Q9Z0M3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cdh20Q9Z0M3 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.39■□□□□ 0.69
Cdh20Q9Z0M3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh20Q9Z0M3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh20Q9Z0M3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Cdh20Q9Z0M3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh20Q9Z0M3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.38■□□□□ 0.69
Cdh20Q9Z0M3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cdh20Q9Z0M3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh20Q9Z0M3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.38■□□□□ 0.69
Cdh20Q9Z0M3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh20Q9Z0M3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh20Q9Z0M3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh20Q9Z0M3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh20Q9Z0M3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh20Q9Z0M3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cdh20Q9Z0M3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh20Q9Z0M3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh20Q9Z0M3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh20Q9Z0M3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh20Q9Z0M3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.37■□□□□ 0.69
Cdh20Q9Z0M3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.37■□□□□ 0.69
Cdh20Q9Z0M3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh20Q9Z0M3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh20Q9Z0M3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh20Q9Z0M3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Cdh20Q9Z0M3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms