Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp6ap1Q9R1Q9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Atp6ap1Q9R1Q9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Atp6ap1Q9R1Q9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6ap1Q9R1Q9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6ap1Q9R1Q9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6ap1Q9R1Q9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6ap1Q9R1Q9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6ap1Q9R1Q9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6ap1Q9R1Q9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Atp6ap1Q9R1Q9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.6■□□□□ 0.89
Atp6ap1Q9R1Q9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp6ap1Q9R1Q9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Atp6ap1Q9R1Q9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6ap1Q9R1Q9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Atp6ap1Q9R1Q9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6ap1Q9R1Q9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.59■□□□□ 0.89
Atp6ap1Q9R1Q9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Atp6ap1Q9R1Q9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.59■□□□□ 0.89
Atp6ap1Q9R1Q9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atp6ap1Q9R1Q9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atp6ap1Q9R1Q9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Atp6ap1Q9R1Q9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Atp6ap1Q9R1Q9 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.58■□□□□ 0.88
Atp6ap1Q9R1Q9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Atp6ap1Q9R1Q9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atp6ap1Q9R1Q9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Atp6ap1Q9R1Q9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atp6ap1Q9R1Q9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.58■□□□□ 0.88
Atp6ap1Q9R1Q9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Atp6ap1Q9R1Q9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Atp6ap1Q9R1Q9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atp6ap1Q9R1Q9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp6ap1Q9R1Q9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp6ap1Q9R1Q9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.57■□□□□ 0.88
Atp6ap1Q9R1Q9 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.57■□□□□ 0.88
Atp6ap1Q9R1Q9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp6ap1Q9R1Q9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.57■□□□□ 0.88
Atp6ap1Q9R1Q9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp6ap1Q9R1Q9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp6ap1Q9R1Q9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Atp6ap1Q9R1Q9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atp6ap1Q9R1Q9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Atp6ap1Q9R1Q9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp6ap1Q9R1Q9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp6ap1Q9R1Q9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp6ap1Q9R1Q9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Atp6ap1Q9R1Q9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp6ap1Q9R1Q9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp6ap1Q9R1Q9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp6ap1Q9R1Q9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Atp6ap1Q9R1Q9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Atp6ap1Q9R1Q9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp6ap1Q9R1Q9 Gm10232-201ENSMUST00000089221 720 ntBASIC20.54■□□□□ 0.88
Atp6ap1Q9R1Q9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Atp6ap1Q9R1Q9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp6ap1Q9R1Q9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Atp6ap1Q9R1Q9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp6ap1Q9R1Q9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp6ap1Q9R1Q9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp6ap1Q9R1Q9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Atp6ap1Q9R1Q9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Atp6ap1Q9R1Q9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Atp6ap1Q9R1Q9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Atp6ap1Q9R1Q9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Atp6ap1Q9R1Q9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp6ap1Q9R1Q9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atp6ap1Q9R1Q9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp6ap1Q9R1Q9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp6ap1Q9R1Q9 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.52■□□□□ 0.88
Atp6ap1Q9R1Q9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp6ap1Q9R1Q9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp6ap1Q9R1Q9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Atp6ap1Q9R1Q9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp6ap1Q9R1Q9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Atp6ap1Q9R1Q9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atp6ap1Q9R1Q9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp6ap1Q9R1Q9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp6ap1Q9R1Q9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp6ap1Q9R1Q9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp6ap1Q9R1Q9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Atp6ap1Q9R1Q9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp6ap1Q9R1Q9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp6ap1Q9R1Q9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp6ap1Q9R1Q9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Atp6ap1Q9R1Q9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.5■□□□□ 0.87
Atp6ap1Q9R1Q9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6ap1Q9R1Q9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6ap1Q9R1Q9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6ap1Q9R1Q9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.5■□□□□ 0.87
Atp6ap1Q9R1Q9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Atp6ap1Q9R1Q9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6ap1Q9R1Q9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6ap1Q9R1Q9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Atp6ap1Q9R1Q9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Atp6ap1Q9R1Q9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp6ap1Q9R1Q9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atp6ap1Q9R1Q9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp6ap1Q9R1Q9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atp6ap1Q9R1Q9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms