Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.11■□□□□ 0.65
Hmg20aQ9DC33 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmg20aQ9DC33 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmg20aQ9DC33 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmg20aQ9DC33 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmg20aQ9DC33 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.1■□□□□ 0.65
Hmg20aQ9DC33 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmg20aQ9DC33 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmg20aQ9DC33 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmg20aQ9DC33 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmg20aQ9DC33 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmg20aQ9DC33 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmg20aQ9DC33 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.1■□□□□ 0.65
Hmg20aQ9DC33 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.1■□□□□ 0.65
Hmg20aQ9DC33 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Hmg20aQ9DC33 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmg20aQ9DC33 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmg20aQ9DC33 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.09■□□□□ 0.65
Hmg20aQ9DC33 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Hmg20aQ9DC33 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmg20aQ9DC33 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmg20aQ9DC33 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmg20aQ9DC33 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Hmg20aQ9DC33 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hmg20aQ9DC33 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hmg20aQ9DC33 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hmg20aQ9DC33 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hmg20aQ9DC33 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.08■□□□□ 0.64
Hmg20aQ9DC33 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmg20aQ9DC33 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Hmg20aQ9DC33 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmg20aQ9DC33 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.07■□□□□ 0.64
Hmg20aQ9DC33 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmg20aQ9DC33 Gm37136-201ENSMUST00000194368 194 ntBASIC19.07■□□□□ 0.64
Hmg20aQ9DC33 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.07■□□□□ 0.64
Hmg20aQ9DC33 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmg20aQ9DC33 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmg20aQ9DC33 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmg20aQ9DC33 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmg20aQ9DC33 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hmg20aQ9DC33 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmg20aQ9DC33 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmg20aQ9DC33 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.06■□□□□ 0.64
Hmg20aQ9DC33 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmg20aQ9DC33 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmg20aQ9DC33 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hmg20aQ9DC33 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmg20aQ9DC33 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.06■□□□□ 0.64
Hmg20aQ9DC33 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmg20aQ9DC33 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmg20aQ9DC33 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmg20aQ9DC33 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmg20aQ9DC33 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.05■□□□□ 0.64
Hmg20aQ9DC33 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hmg20aQ9DC33 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hmg20aQ9DC33 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.05■□□□□ 0.64
Hmg20aQ9DC33 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmg20aQ9DC33 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmg20aQ9DC33 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Hmg20aQ9DC33 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmg20aQ9DC33 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.04■□□□□ 0.64
Hmg20aQ9DC33 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.04■□□□□ 0.64
Hmg20aQ9DC33 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmg20aQ9DC33 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmg20aQ9DC33 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.03■□□□□ 0.64
Hmg20aQ9DC33 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Hmg20aQ9DC33 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.03■□□□□ 0.64
Hmg20aQ9DC33 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hmg20aQ9DC33 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmg20aQ9DC33 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20aQ9DC33 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20aQ9DC33 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Hmg20aQ9DC33 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hmg20aQ9DC33 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20aQ9DC33 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Hmg20aQ9DC33 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20aQ9DC33 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20aQ9DC33 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20aQ9DC33 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20aQ9DC33 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hmg20aQ9DC33 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20aQ9DC33 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmg20aQ9DC33 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20aQ9DC33 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20aQ9DC33 Gm6821-201ENSMUST00000107540 542 ntBASIC18.99■□□□□ 0.63
Hmg20aQ9DC33 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.99■□□□□ 0.63
Hmg20aQ9DC33 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms