Protein–RNA interactions for Protein: Q9CWM2

Cdca4, Cell division cycle-associated protein 4, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca4Q9CWM2 Gm5921-201ENSMUST00000075898 882 ntBASIC19.22■□□□□ 0.67
Cdca4Q9CWM2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdca4Q9CWM2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdca4Q9CWM2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.21■□□□□ 0.67
Cdca4Q9CWM2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdca4Q9CWM2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.21■□□□□ 0.67
Cdca4Q9CWM2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.21■□□□□ 0.67
Cdca4Q9CWM2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdca4Q9CWM2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdca4Q9CWM2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdca4Q9CWM2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cdca4Q9CWM2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdca4Q9CWM2 Gm13238-201ENSMUST00000117655 780 ntBASIC19.2■□□□□ 0.66
Cdca4Q9CWM2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdca4Q9CWM2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdca4Q9CWM2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdca4Q9CWM2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdca4Q9CWM2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdca4Q9CWM2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.19■□□□□ 0.66
Cdca4Q9CWM2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdca4Q9CWM2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdca4Q9CWM2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdca4Q9CWM2 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.19■□□□□ 0.66
Cdca4Q9CWM2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdca4Q9CWM2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.18■□□□□ 0.66
Cdca4Q9CWM2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Cdca4Q9CWM2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdca4Q9CWM2 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.18■□□□□ 0.66
Cdca4Q9CWM2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdca4Q9CWM2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdca4Q9CWM2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdca4Q9CWM2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Cdca4Q9CWM2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdca4Q9CWM2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdca4Q9CWM2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdca4Q9CWM2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdca4Q9CWM2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdca4Q9CWM2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdca4Q9CWM2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cdca4Q9CWM2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdca4Q9CWM2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.17■□□□□ 0.66
Cdca4Q9CWM2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Cdca4Q9CWM2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdca4Q9CWM2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdca4Q9CWM2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdca4Q9CWM2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cdca4Q9CWM2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cdca4Q9CWM2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdca4Q9CWM2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.16■□□□□ 0.66
Cdca4Q9CWM2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.16■□□□□ 0.66
Cdca4Q9CWM2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Cdca4Q9CWM2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdca4Q9CWM2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdca4Q9CWM2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cdca4Q9CWM2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cdca4Q9CWM2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca4Q9CWM2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.15■□□□□ 0.66
Cdca4Q9CWM2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca4Q9CWM2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca4Q9CWM2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca4Q9CWM2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca4Q9CWM2 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.14■□□□□ 0.65
Cdca4Q9CWM2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.14■□□□□ 0.65
Cdca4Q9CWM2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.14■□□□□ 0.65
Cdca4Q9CWM2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdca4Q9CWM2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cdca4Q9CWM2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdca4Q9CWM2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cdca4Q9CWM2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdca4Q9CWM2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdca4Q9CWM2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdca4Q9CWM2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cdca4Q9CWM2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cdca4Q9CWM2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cdca4Q9CWM2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdca4Q9CWM2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdca4Q9CWM2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cdca4Q9CWM2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdca4Q9CWM2 Gm43566-201ENSMUST00000196851 808 ntBASIC19.12■□□□□ 0.65
Cdca4Q9CWM2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdca4Q9CWM2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdca4Q9CWM2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cdca4Q9CWM2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdca4Q9CWM2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdca4Q9CWM2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdca4Q9CWM2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdca4Q9CWM2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdca4Q9CWM2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.11■□□□□ 0.65
Cdca4Q9CWM2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cdca4Q9CWM2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdca4Q9CWM2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdca4Q9CWM2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdca4Q9CWM2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdca4Q9CWM2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdca4Q9CWM2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cdca4Q9CWM2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdca4Q9CWM2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdca4Q9CWM2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdca4Q9CWM2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cdca4Q9CWM2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms