Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ska1Q9CPV1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ska1Q9CPV1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Ska1Q9CPV1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.74■□□□□ 0.75
Ska1Q9CPV1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ska1Q9CPV1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ska1Q9CPV1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ska1Q9CPV1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ska1Q9CPV1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ska1Q9CPV1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ska1Q9CPV1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.73■□□□□ 0.75
Ska1Q9CPV1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ska1Q9CPV1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ska1Q9CPV1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ska1Q9CPV1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ska1Q9CPV1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ska1Q9CPV1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ska1Q9CPV1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ska1Q9CPV1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ska1Q9CPV1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ska1Q9CPV1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ska1Q9CPV1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ska1Q9CPV1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ska1Q9CPV1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ska1Q9CPV1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ska1Q9CPV1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ska1Q9CPV1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ska1Q9CPV1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ska1Q9CPV1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ska1Q9CPV1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ska1Q9CPV1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ska1Q9CPV1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ska1Q9CPV1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ska1Q9CPV1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.69■□□□□ 0.74
Ska1Q9CPV1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ska1Q9CPV1 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.69■□□□□ 0.74
Ska1Q9CPV1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ska1Q9CPV1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ska1Q9CPV1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ska1Q9CPV1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ska1Q9CPV1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ska1Q9CPV1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ska1Q9CPV1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ska1Q9CPV1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ska1Q9CPV1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ska1Q9CPV1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.68■□□□□ 0.74
Ska1Q9CPV1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ska1Q9CPV1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ska1Q9CPV1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ska1Q9CPV1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Ska1Q9CPV1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ska1Q9CPV1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.67■□□□□ 0.74
Ska1Q9CPV1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ska1Q9CPV1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ska1Q9CPV1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.67■□□□□ 0.74
Ska1Q9CPV1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ska1Q9CPV1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ska1Q9CPV1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ska1Q9CPV1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ska1Q9CPV1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ska1Q9CPV1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ska1Q9CPV1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ska1Q9CPV1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ska1Q9CPV1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ska1Q9CPV1 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.64■□□□□ 0.74
Ska1Q9CPV1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ska1Q9CPV1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Ska1Q9CPV1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ska1Q9CPV1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ska1Q9CPV1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.64■□□□□ 0.73
Ska1Q9CPV1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ska1Q9CPV1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.64■□□□□ 0.73
Ska1Q9CPV1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Ska1Q9CPV1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ska1Q9CPV1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ska1Q9CPV1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Ska1Q9CPV1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ska1Q9CPV1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ska1Q9CPV1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ska1Q9CPV1 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.63■□□□□ 0.73
Ska1Q9CPV1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ska1Q9CPV1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Ska1Q9CPV1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Ska1Q9CPV1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ska1Q9CPV1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ska1Q9CPV1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ska1Q9CPV1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ska1Q9CPV1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ska1Q9CPV1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.62■□□□□ 0.73
Ska1Q9CPV1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ska1Q9CPV1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ska1Q9CPV1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ska1Q9CPV1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ska1Q9CPV1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ska1Q9CPV1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ska1Q9CPV1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.61■□□□□ 0.73
Ska1Q9CPV1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ska1Q9CPV1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ska1Q9CPV1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ska1Q9CPV1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms