Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim33Q99PP7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trim33Q99PP7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim33Q99PP7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim33Q99PP7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim33Q99PP7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trim33Q99PP7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.75■□□□□ 0.91
Trim33Q99PP7 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.75■□□□□ 0.91
Trim33Q99PP7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim33Q99PP7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim33Q99PP7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim33Q99PP7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim33Q99PP7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim33Q99PP7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim33Q99PP7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim33Q99PP7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim33Q99PP7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trim33Q99PP7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim33Q99PP7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim33Q99PP7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim33Q99PP7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim33Q99PP7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim33Q99PP7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trim33Q99PP7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trim33Q99PP7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim33Q99PP7 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.73■□□□□ 0.91
Trim33Q99PP7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim33Q99PP7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim33Q99PP7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim33Q99PP7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim33Q99PP7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim33Q99PP7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim33Q99PP7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.72■□□□□ 0.91
Trim33Q99PP7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.72■□□□□ 0.91
Trim33Q99PP7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim33Q99PP7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim33Q99PP7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim33Q99PP7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim33Q99PP7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trim33Q99PP7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.72■□□□□ 0.91
Trim33Q99PP7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim33Q99PP7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim33Q99PP7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim33Q99PP7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim33Q99PP7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim33Q99PP7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim33Q99PP7 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.7■□□□□ 0.9
Trim33Q99PP7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Trim33Q99PP7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim33Q99PP7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trim33Q99PP7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim33Q99PP7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim33Q99PP7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim33Q99PP7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim33Q99PP7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trim33Q99PP7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim33Q99PP7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim33Q99PP7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim33Q99PP7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim33Q99PP7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim33Q99PP7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim33Q99PP7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim33Q99PP7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim33Q99PP7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim33Q99PP7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim33Q99PP7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim33Q99PP7 Gm5812-201ENSMUST00000061073 957 ntBASIC20.68■□□□□ 0.9
Trim33Q99PP7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim33Q99PP7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim33Q99PP7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim33Q99PP7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim33Q99PP7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim33Q99PP7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Trim33Q99PP7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim33Q99PP7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim33Q99PP7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim33Q99PP7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim33Q99PP7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim33Q99PP7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trim33Q99PP7 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.66■□□□□ 0.9
Trim33Q99PP7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.66■□□□□ 0.9
Trim33Q99PP7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim33Q99PP7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.66■□□□□ 0.9
Trim33Q99PP7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Trim33Q99PP7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim33Q99PP7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim33Q99PP7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim33Q99PP7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.66■□□□□ 0.9
Trim33Q99PP7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim33Q99PP7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim33Q99PP7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim33Q99PP7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim33Q99PP7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim33Q99PP7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim33Q99PP7 Notumos-201ENSMUST00000151998 2659 ntBASIC20.65■□□□□ 0.9
Trim33Q99PP7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim33Q99PP7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim33Q99PP7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Trim33Q99PP7 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.64■□□□□ 0.89
Trim33Q99PP7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms