Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ubqln4Q99NB8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubqln4Q99NB8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubqln4Q99NB8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubqln4Q99NB8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubqln4Q99NB8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubqln4Q99NB8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubqln4Q99NB8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubqln4Q99NB8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubqln4Q99NB8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubqln4Q99NB8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.12■□□□□ 0.65
Ubqln4Q99NB8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubqln4Q99NB8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ubqln4Q99NB8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.12■□□□□ 0.65
Ubqln4Q99NB8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ubqln4Q99NB8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubqln4Q99NB8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubqln4Q99NB8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ubqln4Q99NB8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubqln4Q99NB8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubqln4Q99NB8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln4Q99NB8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln4Q99NB8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ubqln4Q99NB8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ubqln4Q99NB8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln4Q99NB8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.11■□□□□ 0.65
Ubqln4Q99NB8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.11■□□□□ 0.65
Ubqln4Q99NB8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln4Q99NB8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln4Q99NB8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubqln4Q99NB8 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.1■□□□□ 0.65
Ubqln4Q99NB8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.1■□□□□ 0.65
Ubqln4Q99NB8 Gm43566-201ENSMUST00000196851 808 ntBASIC19.1■□□□□ 0.65
Ubqln4Q99NB8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ubqln4Q99NB8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubqln4Q99NB8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ubqln4Q99NB8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubqln4Q99NB8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.1■□□□□ 0.65
Ubqln4Q99NB8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ubqln4Q99NB8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.1■□□□□ 0.65
Ubqln4Q99NB8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubqln4Q99NB8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ubqln4Q99NB8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ubqln4Q99NB8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubqln4Q99NB8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.09■□□□□ 0.65
Ubqln4Q99NB8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubqln4Q99NB8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubqln4Q99NB8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ubqln4Q99NB8 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.08■□□□□ 0.65
Ubqln4Q99NB8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ubqln4Q99NB8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ubqln4Q99NB8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Ubqln4Q99NB8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ubqln4Q99NB8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ubqln4Q99NB8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ubqln4Q99NB8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.08■□□□□ 0.64
Ubqln4Q99NB8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ubqln4Q99NB8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ubqln4Q99NB8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubqln4Q99NB8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubqln4Q99NB8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubqln4Q99NB8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ubqln4Q99NB8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubqln4Q99NB8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubqln4Q99NB8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubqln4Q99NB8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubqln4Q99NB8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Ubqln4Q99NB8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.07■□□□□ 0.64
Ubqln4Q99NB8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubqln4Q99NB8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubqln4Q99NB8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.07■□□□□ 0.64
Ubqln4Q99NB8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ubqln4Q99NB8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubqln4Q99NB8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ubqln4Q99NB8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ubqln4Q99NB8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubqln4Q99NB8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Ubqln4Q99NB8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
Ubqln4Q99NB8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubqln4Q99NB8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ubqln4Q99NB8 Gm13238-201ENSMUST00000117655 780 ntBASIC19.05■□□□□ 0.64
Ubqln4Q99NB8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.05■□□□□ 0.64
Ubqln4Q99NB8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubqln4Q99NB8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubqln4Q99NB8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubqln4Q99NB8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubqln4Q99NB8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ubqln4Q99NB8 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.04■□□□□ 0.64
Ubqln4Q99NB8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ubqln4Q99NB8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.04■□□□□ 0.64
Ubqln4Q99NB8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ubqln4Q99NB8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubqln4Q99NB8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ubqln4Q99NB8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubqln4Q99NB8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubqln4Q99NB8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubqln4Q99NB8 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.03■□□□□ 0.64
Ubqln4Q99NB8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubqln4Q99NB8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.03■□□□□ 0.64
Ubqln4Q99NB8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms