Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raf1Q99N57 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raf1Q99N57 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raf1Q99N57 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raf1Q99N57 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raf1Q99N57 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Raf1Q99N57 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raf1Q99N57 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Raf1Q99N57 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.73■□□□□ 0.59
Raf1Q99N57 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.73■□□□□ 0.59
Raf1Q99N57 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raf1Q99N57 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.73■□□□□ 0.59
Raf1Q99N57 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raf1Q99N57 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raf1Q99N57 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Raf1Q99N57 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Raf1Q99N57 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raf1Q99N57 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.72■□□□□ 0.59
Raf1Q99N57 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.72■□□□□ 0.59
Raf1Q99N57 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Raf1Q99N57 Iqck-206ENSMUST00000208658 2891 ntBASIC18.72■□□□□ 0.59
Raf1Q99N57 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raf1Q99N57 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Raf1Q99N57 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Raf1Q99N57 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Raf1Q99N57 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raf1Q99N57 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.71■□□□□ 0.59
Raf1Q99N57 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raf1Q99N57 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.71■□□□□ 0.59
Raf1Q99N57 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raf1Q99N57 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raf1Q99N57 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
Raf1Q99N57 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Raf1Q99N57 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raf1Q99N57 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raf1Q99N57 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raf1Q99N57 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raf1Q99N57 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raf1Q99N57 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Raf1Q99N57 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raf1Q99N57 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raf1Q99N57 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raf1Q99N57 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raf1Q99N57 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Raf1Q99N57 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raf1Q99N57 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raf1Q99N57 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Raf1Q99N57 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.69■□□□□ 0.58
Raf1Q99N57 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raf1Q99N57 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raf1Q99N57 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raf1Q99N57 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raf1Q99N57 Gm15546-201ENSMUST00000122095 826 ntBASIC18.68■□□□□ 0.58
Raf1Q99N57 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.68■□□□□ 0.58
Raf1Q99N57 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raf1Q99N57 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Raf1Q99N57 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.67■□□□□ 0.58
Raf1Q99N57 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raf1Q99N57 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Raf1Q99N57 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Raf1Q99N57 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raf1Q99N57 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Raf1Q99N57 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.67■□□□□ 0.58
Raf1Q99N57 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Raf1Q99N57 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Raf1Q99N57 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raf1Q99N57 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raf1Q99N57 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raf1Q99N57 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raf1Q99N57 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Raf1Q99N57 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Raf1Q99N57 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Raf1Q99N57 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Raf1Q99N57 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.66■□□□□ 0.58
Raf1Q99N57 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Raf1Q99N57 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Raf1Q99N57 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Raf1Q99N57 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Raf1Q99N57 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.65■□□□□ 0.58
Raf1Q99N57 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.65■□□□□ 0.58
Raf1Q99N57 Gm44428-201ENSMUST00000204474 874 ntBASIC18.65■□□□□ 0.58
Raf1Q99N57 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.65■□□□□ 0.58
Raf1Q99N57 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Raf1Q99N57 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Raf1Q99N57 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Raf1Q99N57 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Raf1Q99N57 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Raf1Q99N57 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Raf1Q99N57 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Raf1Q99N57 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Raf1Q99N57 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Raf1Q99N57 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Raf1Q99N57 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Raf1Q99N57 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Raf1Q99N57 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Raf1Q99N57 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Raf1Q99N57 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Raf1Q99N57 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Raf1Q99N57 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Raf1Q99N57 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 880.2 ms