Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Lysmd3Q99LE3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lysmd3Q99LE3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lysmd3Q99LE3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Lysmd3Q99LE3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.89■■□□□ 1.09
Lysmd3Q99LE3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lysmd3Q99LE3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.88■■□□□ 1.09
Lysmd3Q99LE3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lysmd3Q99LE3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Lysmd3Q99LE3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.88■■□□□ 1.09
Lysmd3Q99LE3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lysmd3Q99LE3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lysmd3Q99LE3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Lysmd3Q99LE3 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.87■■□□□ 1.09
Lysmd3Q99LE3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Lysmd3Q99LE3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Lysmd3Q99LE3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lysmd3Q99LE3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lysmd3Q99LE3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lysmd3Q99LE3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lysmd3Q99LE3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lysmd3Q99LE3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lysmd3Q99LE3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lysmd3Q99LE3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lysmd3Q99LE3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lysmd3Q99LE3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lysmd3Q99LE3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Lysmd3Q99LE3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.85■■□□□ 1.09
Lysmd3Q99LE3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lysmd3Q99LE3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lysmd3Q99LE3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Lysmd3Q99LE3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lysmd3Q99LE3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lysmd3Q99LE3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lysmd3Q99LE3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lysmd3Q99LE3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Lysmd3Q99LE3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.84■■□□□ 1.09
Lysmd3Q99LE3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.84■■□□□ 1.09
Lysmd3Q99LE3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Lysmd3Q99LE3 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.84■■□□□ 1.09
Lysmd3Q99LE3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.84■■□□□ 1.09
Lysmd3Q99LE3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lysmd3Q99LE3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Lysmd3Q99LE3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.84■■□□□ 1.09
Lysmd3Q99LE3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lysmd3Q99LE3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lysmd3Q99LE3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Lysmd3Q99LE3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lysmd3Q99LE3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lysmd3Q99LE3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.83■■□□□ 1.09
Lysmd3Q99LE3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lysmd3Q99LE3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Lysmd3Q99LE3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Lysmd3Q99LE3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lysmd3Q99LE3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lysmd3Q99LE3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lysmd3Q99LE3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lysmd3Q99LE3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lysmd3Q99LE3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd3Q99LE3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Lysmd3Q99LE3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.81■■□□□ 1.08
Lysmd3Q99LE3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.81■■□□□ 1.08
Lysmd3Q99LE3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd3Q99LE3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd3Q99LE3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd3Q99LE3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd3Q99LE3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lysmd3Q99LE3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lysmd3Q99LE3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Lysmd3Q99LE3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.8■■□□□ 1.08
Lysmd3Q99LE3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lysmd3Q99LE3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lysmd3Q99LE3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.8■■□□□ 1.08
Lysmd3Q99LE3 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.79■■□□□ 1.08
Lysmd3Q99LE3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd3Q99LE3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd3Q99LE3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.79■■□□□ 1.08
Lysmd3Q99LE3 Gm22238-201ENSMUST00000175222 88 ntBASIC21.79■■□□□ 1.08
Lysmd3Q99LE3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd3Q99LE3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd3Q99LE3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd3Q99LE3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Lysmd3Q99LE3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lysmd3Q99LE3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lysmd3Q99LE3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.78■■□□□ 1.08
Lysmd3Q99LE3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lysmd3Q99LE3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.78■■□□□ 1.08
Lysmd3Q99LE3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lysmd3Q99LE3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.77■■□□□ 1.08
Lysmd3Q99LE3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lysmd3Q99LE3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Lysmd3Q99LE3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lysmd3Q99LE3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lysmd3Q99LE3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lysmd3Q99LE3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Lysmd3Q99LE3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Lysmd3Q99LE3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lysmd3Q99LE3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Lysmd3Q99LE3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lysmd3Q99LE3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms