Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb4Q91XZ6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb4Q91XZ6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb4Q91XZ6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhb4Q91XZ6 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.81■□□□□ 0.92
Pcdhb4Q91XZ6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb4Q91XZ6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb4Q91XZ6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.81■□□□□ 0.92
Pcdhb4Q91XZ6 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.81■□□□□ 0.92
Pcdhb4Q91XZ6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb4Q91XZ6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb4Q91XZ6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb4Q91XZ6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhb4Q91XZ6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.8■□□□□ 0.92
Pcdhb4Q91XZ6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdhb4Q91XZ6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb4Q91XZ6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb4Q91XZ6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb4Q91XZ6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb4Q91XZ6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb4Q91XZ6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdhb4Q91XZ6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb4Q91XZ6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb4Q91XZ6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb4Q91XZ6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb4Q91XZ6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb4Q91XZ6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb4Q91XZ6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb4Q91XZ6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb4Q91XZ6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb4Q91XZ6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhb4Q91XZ6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Pcdhb4Q91XZ6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pcdhb4Q91XZ6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb4Q91XZ6 Gm10420-201ENSMUST00000121713 882 ntBASIC20.77■□□□□ 0.92
Pcdhb4Q91XZ6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb4Q91XZ6 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.77■□□□□ 0.92
Pcdhb4Q91XZ6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb4Q91XZ6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdhb4Q91XZ6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pcdhb4Q91XZ6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.77■□□□□ 0.91
Pcdhb4Q91XZ6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb4Q91XZ6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb4Q91XZ6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhb4Q91XZ6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhb4Q91XZ6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Pcdhb4Q91XZ6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb4Q91XZ6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb4Q91XZ6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Pcdhb4Q91XZ6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb4Q91XZ6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Pcdhb4Q91XZ6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb4Q91XZ6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Pcdhb4Q91XZ6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb4Q91XZ6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb4Q91XZ6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb4Q91XZ6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdhb4Q91XZ6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb4Q91XZ6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.75■□□□□ 0.91
Pcdhb4Q91XZ6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb4Q91XZ6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb4Q91XZ6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb4Q91XZ6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Pcdhb4Q91XZ6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb4Q91XZ6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdhb4Q91XZ6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb4Q91XZ6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhb4Q91XZ6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhb4Q91XZ6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb4Q91XZ6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb4Q91XZ6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb4Q91XZ6 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.73■□□□□ 0.91
Pcdhb4Q91XZ6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb4Q91XZ6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb4Q91XZ6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb4Q91XZ6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdhb4Q91XZ6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcdhb4Q91XZ6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb4Q91XZ6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhb4Q91XZ6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhb4Q91XZ6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb4Q91XZ6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhb4Q91XZ6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdhb4Q91XZ6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb4Q91XZ6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb4Q91XZ6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb4Q91XZ6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdhb4Q91XZ6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb4Q91XZ6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhb4Q91XZ6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb4Q91XZ6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb4Q91XZ6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb4Q91XZ6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdhb4Q91XZ6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb4Q91XZ6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb4Q91XZ6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pcdhb4Q91XZ6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Pcdhb4Q91XZ6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdhb4Q91XZ6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb4Q91XZ6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms