Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm1Q8VC85 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm1Q8VC85 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm1Q8VC85 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm1Q8VC85 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm1Q8VC85 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm1Q8VC85 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Gm12366-201ENSMUST00000121722 873 ntBASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Gm5786-201ENSMUST00000085368 882 ntBASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm1Q8VC85 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm1Q8VC85 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.15■□□□□ 0.82
Lsm1Q8VC85 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm1Q8VC85 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Lsm1Q8VC85 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm1Q8VC85 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm1Q8VC85 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lsm1Q8VC85 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm1Q8VC85 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.14■□□□□ 0.81
Lsm1Q8VC85 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm1Q8VC85 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm1Q8VC85 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.14■□□□□ 0.81
Lsm1Q8VC85 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm1Q8VC85 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm1Q8VC85 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm1Q8VC85 Mir6538-201ENSMUST00000183713 110 ntBASIC20.13■□□□□ 0.81
Lsm1Q8VC85 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm1Q8VC85 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm1Q8VC85 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Lsm1Q8VC85 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm1Q8VC85 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm1Q8VC85 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm1Q8VC85 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm1Q8VC85 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.12■□□□□ 0.81
Lsm1Q8VC85 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm1Q8VC85 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm1Q8VC85 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm1Q8VC85 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
Lsm1Q8VC85 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm1Q8VC85 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lsm1Q8VC85 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm1Q8VC85 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm1Q8VC85 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm1Q8VC85 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm1Q8VC85 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lsm1Q8VC85 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm1Q8VC85 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Lsm1Q8VC85 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm1Q8VC85 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm1Q8VC85 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm1Q8VC85 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm1Q8VC85 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Lsm1Q8VC85 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm1Q8VC85 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm1Q8VC85 Gm10420-201ENSMUST00000121713 882 ntBASIC20.1■□□□□ 0.81
Lsm1Q8VC85 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.1■□□□□ 0.81
Lsm1Q8VC85 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm1Q8VC85 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm1Q8VC85 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm1Q8VC85 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm1Q8VC85 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.09■□□□□ 0.81
Lsm1Q8VC85 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm1Q8VC85 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm1Q8VC85 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Lsm1Q8VC85 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm1Q8VC85 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm1Q8VC85 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lsm1Q8VC85 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lsm1Q8VC85 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lsm1Q8VC85 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.08■□□□□ 0.8
Lsm1Q8VC85 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm1Q8VC85 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm1Q8VC85 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm1Q8VC85 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm1Q8VC85 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lsm1Q8VC85 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm1Q8VC85 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm1Q8VC85 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm1Q8VC85 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.06■□□□□ 0.8
Lsm1Q8VC85 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm1Q8VC85 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm1Q8VC85 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm1Q8VC85 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Lsm1Q8VC85 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm1Q8VC85 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm1Q8VC85 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Lsm1Q8VC85 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm1Q8VC85 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Lsm1Q8VC85 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm1Q8VC85 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms