Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap2Q8VC34 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap2Q8VC34 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Rpap2Q8VC34 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
Rpap2Q8VC34 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap2Q8VC34 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap2Q8VC34 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.21■■□□□ 1.31
Rpap2Q8VC34 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap2Q8VC34 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Rpap2Q8VC34 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.2■■□□□ 1.3
Rpap2Q8VC34 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap2Q8VC34 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap2Q8VC34 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Rpap2Q8VC34 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.2■■□□□ 1.3
Rpap2Q8VC34 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap2Q8VC34 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap2Q8VC34 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap2Q8VC34 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap2Q8VC34 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Rpap2Q8VC34 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap2Q8VC34 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
Rpap2Q8VC34 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap2Q8VC34 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Rpap2Q8VC34 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Rpap2Q8VC34 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.18■■□□□ 1.3
Rpap2Q8VC34 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap2Q8VC34 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap2Q8VC34 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Rpap2Q8VC34 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap2Q8VC34 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap2Q8VC34 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpap2Q8VC34 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpap2Q8VC34 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpap2Q8VC34 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.16■■□□□ 1.3
Rpap2Q8VC34 Gm10232-201ENSMUST00000089221 720 ntBASIC23.16■■□□□ 1.3
Rpap2Q8VC34 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.15■■□□□ 1.3
Rpap2Q8VC34 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap2Q8VC34 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap2Q8VC34 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap2Q8VC34 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.15■■□□□ 1.3
Rpap2Q8VC34 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Rpap2Q8VC34 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Rpap2Q8VC34 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap2Q8VC34 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap2Q8VC34 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap2Q8VC34 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rpap2Q8VC34 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Rpap2Q8VC34 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rpap2Q8VC34 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Rpap2Q8VC34 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.14■■□□□ 1.29
Rpap2Q8VC34 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rpap2Q8VC34 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rpap2Q8VC34 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap2Q8VC34 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap2Q8VC34 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap2Q8VC34 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Rpap2Q8VC34 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Rpap2Q8VC34 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap2Q8VC34 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.12■■□□□ 1.29
Rpap2Q8VC34 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpap2Q8VC34 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpap2Q8VC34 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpap2Q8VC34 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rpap2Q8VC34 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.11■■□□□ 1.29
Rpap2Q8VC34 Gm5812-201ENSMUST00000061073 957 ntBASIC23.11■■□□□ 1.29
Rpap2Q8VC34 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rpap2Q8VC34 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Rpap2Q8VC34 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rpap2Q8VC34 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.11■■□□□ 1.29
Rpap2Q8VC34 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.11■■□□□ 1.29
Rpap2Q8VC34 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rpap2Q8VC34 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Rpap2Q8VC34 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap2Q8VC34 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap2Q8VC34 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.1■■□□□ 1.29
Rpap2Q8VC34 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
Rpap2Q8VC34 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap2Q8VC34 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap2Q8VC34 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Rpap2Q8VC34 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Rpap2Q8VC34 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpap2Q8VC34 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpap2Q8VC34 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.09■■□□□ 1.29
Rpap2Q8VC34 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpap2Q8VC34 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Rpap2Q8VC34 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rpap2Q8VC34 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rpap2Q8VC34 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rpap2Q8VC34 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Rpap2Q8VC34 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rpap2Q8VC34 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rpap2Q8VC34 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rpap2Q8VC34 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Rpap2Q8VC34 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rpap2Q8VC34 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rpap2Q8VC34 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Rpap2Q8VC34 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.07■■□□□ 1.28
Rpap2Q8VC34 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.06■■□□□ 1.28
Rpap2Q8VC34 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rpap2Q8VC34 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms