Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc187Q8C5V8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc187Q8C5V8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ccdc187Q8C5V8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ccdc187Q8C5V8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ccdc187Q8C5V8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
Ccdc187Q8C5V8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ccdc187Q8C5V8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.27■■□□□ 1
Ccdc187Q8C5V8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.27■■□□□ 1
Ccdc187Q8C5V8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Ccdc187Q8C5V8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.27■□□□□ 0.99
Ccdc187Q8C5V8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc187Q8C5V8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc187Q8C5V8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc187Q8C5V8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.26■□□□□ 0.99
Ccdc187Q8C5V8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc187Q8C5V8 Gm9870-201ENSMUST00000063874 645 ntBASIC21.26■□□□□ 0.99
Ccdc187Q8C5V8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc187Q8C5V8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc187Q8C5V8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc187Q8C5V8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc187Q8C5V8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.25■□□□□ 0.99
Ccdc187Q8C5V8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.25■□□□□ 0.99
Ccdc187Q8C5V8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ccdc187Q8C5V8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc187Q8C5V8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.25■□□□□ 0.99
Ccdc187Q8C5V8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc187Q8C5V8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc187Q8C5V8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc187Q8C5V8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc187Q8C5V8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc187Q8C5V8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc187Q8C5V8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc187Q8C5V8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.24■□□□□ 0.99
Ccdc187Q8C5V8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc187Q8C5V8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc187Q8C5V8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc187Q8C5V8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc187Q8C5V8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc187Q8C5V8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc187Q8C5V8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc187Q8C5V8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc187Q8C5V8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc187Q8C5V8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc187Q8C5V8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Ccdc187Q8C5V8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc187Q8C5V8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc187Q8C5V8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc187Q8C5V8 Gm45417-201ENSMUST00000209533 758 ntBASIC21.22■□□□□ 0.99
Ccdc187Q8C5V8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc187Q8C5V8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ccdc187Q8C5V8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc187Q8C5V8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc187Q8C5V8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc187Q8C5V8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc187Q8C5V8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc187Q8C5V8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc187Q8C5V8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccdc187Q8C5V8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc187Q8C5V8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
Ccdc187Q8C5V8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc187Q8C5V8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc187Q8C5V8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc187Q8C5V8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc187Q8C5V8 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.19■□□□□ 0.98
Ccdc187Q8C5V8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc187Q8C5V8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc187Q8C5V8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc187Q8C5V8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Ccdc187Q8C5V8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc187Q8C5V8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc187Q8C5V8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc187Q8C5V8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc187Q8C5V8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc187Q8C5V8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc187Q8C5V8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc187Q8C5V8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc187Q8C5V8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc187Q8C5V8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccdc187Q8C5V8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc187Q8C5V8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc187Q8C5V8 Serp2-204ENSMUST00000228055 705 ntBASIC21.16■□□□□ 0.98
Ccdc187Q8C5V8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc187Q8C5V8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc187Q8C5V8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc187Q8C5V8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc187Q8C5V8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc187Q8C5V8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc187Q8C5V8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc187Q8C5V8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.15■□□□□ 0.98
Ccdc187Q8C5V8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.15■□□□□ 0.98
Ccdc187Q8C5V8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc187Q8C5V8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc187Q8C5V8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc187Q8C5V8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc187Q8C5V8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc187Q8C5V8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc187Q8C5V8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc187Q8C5V8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc187Q8C5V8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms