Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc60Q8C4J0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc60Q8C4J0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc60Q8C4J0 Gm18755-201ENSMUST00000218030 1099 ntBASIC26.94■■□□□ 1.9
Ccdc60Q8C4J0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26.94■■□□□ 1.9
Ccdc60Q8C4J0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Ccdc60Q8C4J0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc60Q8C4J0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc60Q8C4J0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc60Q8C4J0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Ccdc60Q8C4J0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ccdc60Q8C4J0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC26.92■■□□□ 1.9
Ccdc60Q8C4J0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc60Q8C4J0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc60Q8C4J0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
Ccdc60Q8C4J0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC26.91■■□□□ 1.9
Ccdc60Q8C4J0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
Ccdc60Q8C4J0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc60Q8C4J0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc60Q8C4J0 AC116713.1-201ENSMUST00000215074 430 ntBASIC26.9■■□□□ 1.9
Ccdc60Q8C4J0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC26.9■■□□□ 1.9
Ccdc60Q8C4J0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc60Q8C4J0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc60Q8C4J0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ccdc60Q8C4J0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC26.89■■□□□ 1.9
Ccdc60Q8C4J0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ccdc60Q8C4J0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ccdc60Q8C4J0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Ccdc60Q8C4J0 Gm32051-202ENSMUST00000197905 2385 ntBASIC26.89■■□□□ 1.89
Ccdc60Q8C4J0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc60Q8C4J0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC26.88■■□□□ 1.89
Ccdc60Q8C4J0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc60Q8C4J0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc60Q8C4J0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
Ccdc60Q8C4J0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc60Q8C4J0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc60Q8C4J0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
Ccdc60Q8C4J0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc60Q8C4J0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc60Q8C4J0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc60Q8C4J0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc60Q8C4J0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc60Q8C4J0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc60Q8C4J0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc60Q8C4J0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc60Q8C4J0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC26.86■■□□□ 1.89
Ccdc60Q8C4J0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc60Q8C4J0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc60Q8C4J0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
Ccdc60Q8C4J0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC26.85■■□□□ 1.89
Ccdc60Q8C4J0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc60Q8C4J0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc60Q8C4J0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC26.85■■□□□ 1.89
Ccdc60Q8C4J0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc60Q8C4J0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC26.85■■□□□ 1.89
Ccdc60Q8C4J0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
Ccdc60Q8C4J0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC26.84■■□□□ 1.89
Ccdc60Q8C4J0 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.84■■□□□ 1.89
Ccdc60Q8C4J0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC26.84■■□□□ 1.89
Ccdc60Q8C4J0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC26.84■■□□□ 1.89
Ccdc60Q8C4J0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc60Q8C4J0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc60Q8C4J0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ccdc60Q8C4J0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ccdc60Q8C4J0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC26.83■■□□□ 1.89
Ccdc60Q8C4J0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Ccdc60Q8C4J0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC26.83■■□□□ 1.89
Ccdc60Q8C4J0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ccdc60Q8C4J0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ccdc60Q8C4J0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ccdc60Q8C4J0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC26.82■■□□□ 1.88
Ccdc60Q8C4J0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ccdc60Q8C4J0 Gm10620-201ENSMUST00000098379 1332 ntBASIC26.82■■□□□ 1.88
Ccdc60Q8C4J0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ccdc60Q8C4J0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ccdc60Q8C4J0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ccdc60Q8C4J0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC26.81■■□□□ 1.88
Ccdc60Q8C4J0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Ccdc60Q8C4J0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ccdc60Q8C4J0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Ccdc60Q8C4J0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ccdc60Q8C4J0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ccdc60Q8C4J0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ccdc60Q8C4J0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC26.79■■□□□ 1.88
Ccdc60Q8C4J0 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.79■■□□□ 1.88
Ccdc60Q8C4J0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ccdc60Q8C4J0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ccdc60Q8C4J0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ccdc60Q8C4J0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC26.78■■□□□ 1.88
Ccdc60Q8C4J0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Ccdc60Q8C4J0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC26.77■■□□□ 1.88
Ccdc60Q8C4J0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ccdc60Q8C4J0 Gm10399-202ENSMUST00000202768 748 ntBASIC26.77■■□□□ 1.88
Ccdc60Q8C4J0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.77■■□□□ 1.88
Ccdc60Q8C4J0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ccdc60Q8C4J0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ccdc60Q8C4J0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC26.76■■□□□ 1.87
Ccdc60Q8C4J0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC26.76■■□□□ 1.87
Ccdc60Q8C4J0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ccdc60Q8C4J0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms