Protein–RNA interactions for Protein: Q8BPC6

Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8BPC6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q8BPC6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Q8BPC6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Q8BPC6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Q8BPC6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Q8BPC6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q8BPC6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.39■□□□□ 0.69
Q8BPC6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q8BPC6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8BPC6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q8BPC6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8BPC6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.38■□□□□ 0.69
Q8BPC6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.38■□□□□ 0.69
Q8BPC6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Q8BPC6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8BPC6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8BPC6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8BPC6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8BPC6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8BPC6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8BPC6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8BPC6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8BPC6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Q8BPC6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Q8BPC6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.37■□□□□ 0.69
Q8BPC6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8BPC6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8BPC6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8BPC6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.37■□□□□ 0.69
Q8BPC6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.37■□□□□ 0.69
Q8BPC6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8BPC6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8BPC6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q8BPC6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q8BPC6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q8BPC6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q8BPC6 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.36■□□□□ 0.69
Q8BPC6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q8BPC6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q8BPC6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Q8BPC6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Q8BPC6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q8BPC6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.35■□□□□ 0.69
Q8BPC6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q8BPC6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q8BPC6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.35■□□□□ 0.69
Q8BPC6 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.35■□□□□ 0.69
Q8BPC6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.35■□□□□ 0.69
Q8BPC6 Gm45444-201ENSMUST00000211394 898 ntBASIC19.35■□□□□ 0.69
Q8BPC6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Q8BPC6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Q8BPC6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q8BPC6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Q8BPC6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q8BPC6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q8BPC6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q8BPC6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Q8BPC6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Q8BPC6 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.34■□□□□ 0.69
Q8BPC6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q8BPC6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q8BPC6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q8BPC6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Q8BPC6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q8BPC6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Q8BPC6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.33■□□□□ 0.68
Q8BPC6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q8BPC6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q8BPC6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q8BPC6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Q8BPC6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8BPC6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8BPC6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8BPC6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Q8BPC6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.32■□□□□ 0.68
Q8BPC6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8BPC6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.32■□□□□ 0.68
Q8BPC6 Gm5921-201ENSMUST00000075898 882 ntBASIC19.32■□□□□ 0.68
Q8BPC6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Q8BPC6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Q8BPC6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8BPC6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Q8BPC6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q8BPC6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Q8BPC6 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.31■□□□□ 0.68
Q8BPC6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Q8BPC6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Q8BPC6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Q8BPC6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q8BPC6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8BPC6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q8BPC6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q8BPC6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.3■□□□□ 0.68
Q8BPC6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8BPC6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8BPC6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q8BPC6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Q8BPC6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8BPC6 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.29■□□□□ 0.68
Q8BPC6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms