Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf38bQ80SY5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf38bQ80SY5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf38bQ80SY5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.88■■□□□ 1.09
Prpf38bQ80SY5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.88■■□□□ 1.09
Prpf38bQ80SY5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf38bQ80SY5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf38bQ80SY5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf38bQ80SY5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf38bQ80SY5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Prpf38bQ80SY5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf38bQ80SY5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.87■■□□□ 1.09
Prpf38bQ80SY5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Prpf38bQ80SY5 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.87■■□□□ 1.09
Prpf38bQ80SY5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf38bQ80SY5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf38bQ80SY5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf38bQ80SY5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.86■■□□□ 1.09
Prpf38bQ80SY5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
Prpf38bQ80SY5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.86■■□□□ 1.09
Prpf38bQ80SY5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.86■■□□□ 1.09
Prpf38bQ80SY5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf38bQ80SY5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf38bQ80SY5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf38bQ80SY5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Prpf38bQ80SY5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
Prpf38bQ80SY5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf38bQ80SY5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf38bQ80SY5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf38bQ80SY5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.85■■□□□ 1.09
Prpf38bQ80SY5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf38bQ80SY5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Golgb1-201ENSMUST00000023534 498 ntBASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf38bQ80SY5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf38bQ80SY5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.83■■□□□ 1.09
Prpf38bQ80SY5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf38bQ80SY5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf38bQ80SY5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf38bQ80SY5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Prpf38bQ80SY5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Prpf38bQ80SY5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf38bQ80SY5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf38bQ80SY5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf38bQ80SY5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.82■■□□□ 1.08
Prpf38bQ80SY5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.82■■□□□ 1.08
Prpf38bQ80SY5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.82■■□□□ 1.08
Prpf38bQ80SY5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
Prpf38bQ80SY5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf38bQ80SY5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf38bQ80SY5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.82■■□□□ 1.08
Prpf38bQ80SY5 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.82■■□□□ 1.08
Prpf38bQ80SY5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Prpf38bQ80SY5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Prpf38bQ80SY5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf38bQ80SY5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf38bQ80SY5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf38bQ80SY5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf38bQ80SY5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.81■■□□□ 1.08
Prpf38bQ80SY5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
Prpf38bQ80SY5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Prpf38bQ80SY5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.81■■□□□ 1.08
Prpf38bQ80SY5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Prpf38bQ80SY5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf38bQ80SY5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Prpf38bQ80SY5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf38bQ80SY5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.79■■□□□ 1.08
Prpf38bQ80SY5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.79■■□□□ 1.08
Prpf38bQ80SY5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf38bQ80SY5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf38bQ80SY5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf38bQ80SY5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf38bQ80SY5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf38bQ80SY5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf38bQ80SY5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf38bQ80SY5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf38bQ80SY5 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.78■■□□□ 1.08
Prpf38bQ80SY5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
Prpf38bQ80SY5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Prpf38bQ80SY5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf38bQ80SY5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf38bQ80SY5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf38bQ80SY5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf38bQ80SY5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms